WormBase Tree Display for Gene: WBGene00018982

WBGene00018982 SMap: S_parent: Sequence: F56F4
  Identity: Version: 3
    Name: CGC_name: abt-6 Paper_evidence: WBPaper00028961
          Person_evidence: WBPerson36
            WBPerson2264
      Sequence_name: F56F4.6
      Molecular_name: F56F4.6
      Other_name: CELE_F56F4.6 Accession_evidence: NDB BX284601
      Public_name: abt-6
    DB_info: Database: AceView gene 1G716
        WormQTL gene WBGene00018982
        WormFlux gene WBGene00018982
        NDB locus_tag CELE_F56F4.6
        NCBI gene 186400
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 21 Jun 2007 14:37:04 WBPerson2970 Name_change: CGC_name: abt-6
        3 26 Sep 2019 11:16:34 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: abt
    Allele (16)
    RNASeq_FPKM (74)
    Ortholog: WBGene00124401 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00213187 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00077016 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00083265 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00075632 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00110316 Pristionchus pacificus From_analysis: Inparanoid_8
    Structured_description: Concise_description: F56F4.6 encodes a protein that contains an ATP-binding cassette (ABC) that is most closely related to that of the ABCA subfamily of ABC transport proteins; as the product of F56F4.6 lacks a predicted transmembrane domain, and as loss of F56F4.6 activity via RNAi results in no obvious defects, the precise role of this gene in C. elegans development and/or behavior is not yet known. Paper_evidence: WBPaper00006421
          Curator_confirmed: WBPerson1843
          Date_last_updated: 06 Mar 2006 00:00:00
      Automated_description: Is affected by several genes including sir-2.1; drh-3; and smg-2 based on microarray and RNA-seq studies. Is affected by four chemicals including Tunicamycin; Lithium Chloride; and lithium carbonate based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: F56F4.6:wp179
      F56F4.6:wp273
    Corresponding_pseudogene: F56F4.6
    Other_sequence: PPC00031_1
      BE239212.1
      Tcir_isotig25968
      Tcol_isotig07462
      MIC02977_1
      GW410329.1
      PSC01869_1
      MI03452
      PP01155
    Associated_feature: WBsf983844
  Experimental_info: Expr_pattern: Expr3318
      Expr1013446
      Expr1152504
    Drives_construct: WBCnstr00011314
      WBCnstr00026150
    Construct_product: WBCnstr00026150
    Microarray_results (16)
    Expression_cluster (22)
    Interaction (40)
  Map_info: Map: I Position: 0.800788 Error: 0.003674
    Positive: Positive_clone: F56F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006421
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene