WormBase Tree Display for Gene: WBGene00018970

WBGene00018970 SMap: S_parent: Sequence: F56D6
  Identity: Version: 3
    Name: CGC_name: clec-68 Person_evidence: WBPerson261
            WBPerson655
      Sequence_name: F56D6.1
      Molecular_name: F56D6.1
        F56D6.1.1
        CE48753
      Other_name: CELE_F56D6.1 Accession_evidence: NDB BX284604
      Public_name: clec-68
    DB_info: Database: AceView gene 4E693
        WormQTL gene WBGene00018970
        WormFlux gene WBGene00018970
        NDB locus_tag CELE_F56D6.1
        Panther gene CAEEL|WormBase=WBGene00018970|UniProtKB=Q3LFM3
          family PTHR23062
        NCBI gene 186388
        RefSeq protein NM_068037.7
        TREEFAM TREEFAM_ID TF317818
        TrEMBL UniProtAcc Q3LFM3
        UniProt_GCRP UniProtAcc Q3LFM3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 28 Sep 2005 17:37:12 WBPerson1849 Event: Split_into: WBGene00044642
        3 28 Sep 2005 17:40:12 WBPerson2970 Name_change: CGC_name: clec-68
      Split_into: WBGene00044642
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (55)
    Strain: WBStrain00036990
    RNASeq_FPKM (74)
    GO_annotation: 00080542
    Ortholog (18)
    Paralog (45)
    Structured_description: Automated_description: Involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F56D6.1
    Corresponding_CDS_history: F56D6.1:wp149
      F56D6.1:wp202
      F56D6.1:wp239
    Corresponding_transcript: F56D6.1.1
    Associated_feature: WBsf996122
      WBsf1017152
  Experimental_info: RNAi_result: WBRNAi00048720 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026875
      Expr1152466
      Expr2010201
      Expr2028442
    Microarray_results (13)
    Expression_cluster: WBPaper00030922:glycosylated_protein
      WBPaper00032022:X-Ray_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00044030:nhr-8(hd117)_upregulated
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_downregulated
      WBPaper00048926:miaserin_upregulated_adult-day10
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00049498:npr-1(ur89)_regulated_7
      WBPaper00050096:P.aeruginosa_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
      WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
      WBPaper00056330:glycine_upregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00058598:spn-4(tm291)_downregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059527:lsm-1_upregulated_L1
      WBPaper00059754:P.aeruginosa_PA14_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064494:postdauer_downregulated_WholeAnimal
      WBPaper00064871:P.fluorescens_upregulated_AWA
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065746:eat-2(ad1113)_upregulated
      WBPaper00065746:tmc-1(rg1003)_downregulated
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      WBPaper00027722:Microbacterium_nematophilum_upregulated
      WBPaper00028474:dys-1_upregulated
      WBPaper00028789:PA14_vs_gacA_upregulated_4hr
      WBPaper00028789:PA14_vs_gacA_upregulated_8hr
      WBPaper00028789:PA14_vs_OP50_upregulated_4hr
      WBPaper00028789:PA14_vs_OP50_upregulated_8hr
      WBPaper00028789:pmk-1_upregulated
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp1
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035873:osmotically_regulated
      WBPaper00035891:zip-2(RNAi)_downregulated
      WBPaper00035892:KIM5_vs_OP50_Up
      WBPaper00035892:Y.pestis_regulated
      WBPaper00036383:ash-2_L3_regulated
      WBPaper00038060:SUMO-1_downregulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00038304:octr-1_regulated
      WBPaper00038462:aging_downregulated
      WBPaper00039792:TempShiftIncrease
      WBPaper00039851:Live_C_albicans_vs_HK_C_albicans
      WBPaper00039851:Live_C_albicans_vs_HK_OP50
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041211:RPW-24_Up
      WBPaper00041267:SpaceFlight_Downregulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00042067:Cu2+_upregulated_WT
      WBPaper00042574:JU1580_OrsayVirus_upregulated
      WBPaper00046083:pmk-1(km25)_OP50_downregulated
      WBPaper00046548:dafachronic-acid_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00049311:AgNO3_regulated
      WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated
      WBPaper00050650:mBmkTX_upregulated
      WBPaper00050767:Octopamine_induced
      WBPaper00053688:E.faecalis_downregulated
      WBPaper00053688:E.faecium_downregulated
      WBPaper00055435:MUA-AuNP-0.5_upregulated
      WBPaper00055435:MUA-AuNP-3_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
  Map_info: Map: IV Position: -1.64784 Error: 0.01747
    Positive: Positive_clone: F56D6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031686
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene