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WormBase Tree Display for Gene: WBGene00018641

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Name Class

WBGene00018641SMapS_parentSequenceF49E10
IdentityVersion1
NameSequence_nameF49E10.4
Molecular_nameF49E10.4
F49E10.4.1
CE53268
Other_nameCELE_F49E10.4Accession_evidenceNDBBX284606
Public_nameF49E10.4
DB_infoDatabaseAceViewgeneXG499
WormQTLgeneWBGene00018641
WormFluxgeneWBGene00018641
NDBlocus_tagCELE_F49E10.4
PanthergeneCAEEL|WormBase=WBGene00018641|UniProtKB=H2L061
familyPTHR21771
NCBIgene186045
RefSeqproteinNM_001373311.3
TrEMBLUniProtAccA0A4V6M500
UniProt_GCRPUniProtAccA0A4V6M500
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (106)
RNASeq_FPKM (74)
GO_annotation00004005
00004006
00004007
00123727
00123728
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to be involved in mitochondrial protein catabolic process and mitophagy by induced vacuole formation. Predicted to be located in mitochondrial outer membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF49E10.4
Corresponding_CDS_historyF49E10.4a:wp108
F49E10.4a:wp271
F49E10.4b:wp271
Corresponding_transcriptF49E10.4.1
Associated_featureWBsf662841
WBsf1005421
WBsf1005422
WBsf1023031
WBsf1023032
WBsf235766
Experimental_infoRNAi_resultWBRNAi00015303Inferred_automaticallyRNAi_primary
WBRNAi00032527Inferred_automaticallyRNAi_primary
WBRNAi00047834Inferred_automaticallyRNAi_primary
Expr_patternExpr1024451
Expr1038025
Expr1151669
Expr2003935
Expr2022157
Drives_constructWBCnstr00026365
Construct_productWBCnstr00026365
Microarray_results (22)
Expression_clusterWBPaper00035211:age-1_vs_age-1_downregulated
WBPaper00035211:age-1_vs_N2_downregulated
WBPaper00037946:LIN-39_interacting
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00046024:sleep_upregulated_oscillating
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050182:lmn-1(L535P)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:ant_arc_V
WBPaper00061340:CEPso
WBPaper00061340:hyp1V_and_ant_arc_V
WBPaper00061340:IL1
WBPaper00061340:ILso
WBPaper00061340:mu_int_mu_anal
WBPaper00061340:pm1_pm2
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:acy-2-F35C5.11
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064494:postdauer_upregulated_AWA
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065560:E.coli-HB101_downregulated_F3
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:26_2
WBPaper00065841:39_1
WBPaper00065841:44_0
WBPaper00065841:50_0
WBPaper00065841:52_0
WBPaper00065841:68_0
WBPaper00065841:70_0
WBPaper00065841:70_1
WBPaper00065841:94_0
WBPaper00065841:111_0
WBPaper00065841:115_0
WBPaper00065841:118_0
WBPaper00065841:124_0
WBPaper00065841:125_0
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00024671:AFD_vs_AWB_upregulated
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00032948:FedUp
WBPaper00034739:N2moreDR1350
WBPaper00036130:mir-243_up_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040876:mir-35_downregulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00045294:50uM_DBAA_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (16)
Map_infoPositivePositive_cloneF49E10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-4.14331
MethodGene