WormBase Tree Display for Gene: WBGene00018640
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| WBGene00018640 | SMap | S_parent | Sequence | F49E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49E10.2 | |||||||
| Molecular_name | F49E10.2a | ||||||||
| F49E10.2a.1 | |||||||||
| CE07263 | |||||||||
| F49E10.2b | |||||||||
| CE29384 | |||||||||
| F49E10.2b.1 | |||||||||
| Other_name | CELE_F49E10.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F49E10.2 | ||||||||
| DB_info | Database | AceView | gene | XG513 | |||||
| WormQTL | gene | WBGene00018640 | |||||||
| WormFlux | gene | WBGene00018640 | |||||||
| NDB | locus_tag | CELE_F49E10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018640|UniProtKB=H2L060 | |||||||
| family | PTHR10543 | ||||||||
| NCBI | gene | 180855 | |||||||
| RefSeq | protein | NM_076586.5 | |||||||
| NM_076585.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF320271 | |||||||
| TrEMBL | UniProtAcc | H2L060 | |||||||
| Q20599 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L060 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (58) | |||||||||
| Strain | WBStrain00032157 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022899 | ||||||||
| 00022900 | |||||||||
| 00022901 | |||||||||
| 00022902 | |||||||||
| 00022903 | |||||||||
| 00123726 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00012914 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00017780 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018755 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable beta-carotene 15,15'-dioxygenase activity and carotenoid dioxygenase activity. Predicted to be involved in carotene catabolic process and retinal metabolic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49E10.2a | |||||||
| F49E10.2b | |||||||||
| Corresponding_transcript | F49E10.2a.1 | ||||||||
| F49E10.2b.1 | |||||||||
| Other_sequence | Oden_isotig14577 | ||||||||
| JI223880.1 | |||||||||
| Oden_isotig24207 | |||||||||
| DIC01626_1 | |||||||||
| JI178206.1 | |||||||||
| JI221267.1 | |||||||||
| DI00284 | |||||||||
| Associated_feature | WBsf648171 | ||||||||
| WBsf662842 | |||||||||
| WBsf662843 | |||||||||
| WBsf1005424 | |||||||||
| WBsf1005425 | |||||||||
| WBsf1023033 | |||||||||
| WBsf235768 | |||||||||
| WBsf235769 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047832 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015301 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032526 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015352 | ||||||||
| Expr1038024 | |||||||||
| Expr1151667 | |||||||||
| Expr2003934 | |||||||||
| Expr2022156 | |||||||||
| Drives_construct | WBCnstr00026366 | ||||||||
| Construct_product | WBCnstr00026366 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (206) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Positive | Positive_clone | F49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -4.11835 | |||||||
| Method | Gene |
