WormBase Tree Display for Gene: WBGene00017780
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| WBGene00017780 | SMap | S_parent | Sequence | F25E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F25E2.2 | |||||||
| Molecular_name | F25E2.2a | ||||||||
| F25E2.2a.1 | |||||||||
| CE37106 | |||||||||
| F25E2.2b | |||||||||
| CE43807 | |||||||||
| F25E2.2b.1 | |||||||||
| Other_name | CELE_F25E2.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F25E2.2 | ||||||||
| DB_info | Database | AceView | gene | XB426 | |||||
| WormQTL | gene | WBGene00017780 | |||||||
| WormFlux | gene | WBGene00017780 | |||||||
| NDB | locus_tag | CELE_F25E2.2 | |||||||
| NCBI | gene | 180428 | |||||||
| RefSeq | protein | NM_001270049.3 | |||||||
| NM_001270050.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF320271 | |||||||
| TrEMBL | UniProtAcc | Q19780 | |||||||
| G4SF79 | |||||||||
| UniProt_GCRP | UniProtAcc | G4SF79 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (58) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00018640 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in GABAergic neurons and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; proteomic; tiling array; and RNA-seq studies. Is affected by twelve chemicals including Mercuric Chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25E2.2a | |||||||
| F25E2.2b | |||||||||
| Corresponding_CDS_history | F25E2.2:wp128 | ||||||||
| F25E2.2:wp203 | |||||||||
| Corresponding_transcript | F25E2.2a.1 | ||||||||
| F25E2.2b.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf670080 | ||||||||
| WBsf1003870 | |||||||||
| WBsf1022175 | |||||||||
| WBsf236960 | |||||||||
| WBsf236961 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045496 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013866 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031368 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026001 | ||||||||
| Expr1149415 | |||||||||
| Expr2002955 | |||||||||
| Expr2021171 | |||||||||
| Drives_construct | WBCnstr00027023 | ||||||||
| Construct_product | WBCnstr00027023 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (166) | |||||||||
| Interaction (205) | |||||||||
| Map_info | Positive | Positive_clone | F25E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -19.4998 | |||||||
| Method | Gene |
