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WormBase Tree Display for Gene: WBGene00018538

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Name Class

WBGene00018538SMapS_parentSequenceF47B7
IdentityVersion2
NameCGC_namemarg-1Paper_evidenceWBPaper00046090
Sequence_nameF47B7.7
Molecular_nameF47B7.7a
F47B7.7a.1
CE35544
F47B7.7b
CE43827
F47B7.7b.1
Other_nameCELE_F47B7.7Accession_evidenceNDBBX284606
Public_namemarg-1
DB_infoDatabaseAceViewgeneXE398
WormQTLgeneWBGene00018538
WormFluxgeneWBGene00018538
NDBlocus_tagCELE_F47B7.7
NCBIgene180665
RefSeqproteinNM_001270076.5
NM_001270075.4
TREEFAMTREEFAM_IDTF317537
TrEMBLUniProtAccH2KZY6
C6KRG1
UniProt_GCRPUniProtAccH2KZY6
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
230 Nov 2015 15:03:18WBPerson2970Name_changeCGC_namemarg-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmarg
Allele (44)
RNASeq_FPKM (74)
Ortholog (27)
Structured_descriptionConcise_descriptionF47B7.7 encodes a novel protein conserved amongst nematode species.Paper_evidenceWBPaper00032965
Curator_confirmedWBPerson1843
Date_last_updated30 Apr 2009 00:00:00
Automated_descriptionExpressed in marginal cell. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF47B7.7a
F47B7.7b
Corresponding_CDS_historyF47B7.7:wp108
Corresponding_transcriptF47B7.7a.1
F47B7.7b.1
Other_sequence (18)
Associated_featureWBsf1004713
WBsf1004714
WBsf1004715
WBsf1004716
WBsf237213
WBsf237214
WBsf237215
WBsf237216
Experimental_infoRNAi_resultWBRNAi00015157Inferred_automaticallyRNAi_primary
WBRNAi00032416Inferred_automaticallyRNAi_primary
WBRNAi00047615Inferred_automaticallyRNAi_primary
Expr_patternExpr12510
Expr12511
Expr1027453
Expr1037986
Expr1151452
Expr2013388
Expr2031620
Drives_constructWBCnstr00021420
WBCnstr00026435
Construct_productWBCnstr00026435
Microarray_results (20)
Expression_clusterWBPaper00028451:Oogenic_protein
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00043945:MeHg_downregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044260:nicotinc-acid_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044760:germline_specific
WBPaper00045017:blmp-1(tm548)_upregulated
WBPaper00045390:tunicamycin_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048988:neuron_expressed
WBPaper00049290:rsks-1(sv31)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:body-muscle_enriched
WBPaper00050990:body-muscle_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
WBPaper00054410:set-9(rw5)_upregulated
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:anterior-head_expressed
WBPaper00055648:pharynx_expressed
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_upregulated_L3
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_L1
WBPaper00059816:crh-1(n3315)_uprgulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061340:ant_arc_V
WBPaper00061340:Posterior_arcade_cell
WBPaper00061340:Z1_Z4
WBPaper00061341:28C_48h_upregulated
WBPaper00061377:MYRF-2_interacting
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:F40F8.4-C33G8.4
WBPaper00061818:ELKS-1_interacting
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062347:blmp-1(tm548)_upregulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_downregulated_N2_protein
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065032:PAO1_vs_Delt.Pf4-infection_downregulated
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065623:57
WBPaper00065823:pmk-1(km25)_upregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:9_0
WBPaper00065841:9_1
WBPaper00065841:9_2
WBPaper00065841:26_1
WBPaper00065841:36_3
WBPaper00065841:75_0
WBPaper00065841:141_0
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_10
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00034661:AgNPs_downregulated
WBPaper00036286:Pattern_G
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00040821:Au-NP_regulated
WBPaper00040858:eQTL_regulated_developing
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00046083:oga-1(ok1207)_OP50_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00056330:mrps-5(RNAi)_upregulated
[cgc6390]:Cluster_B
Interaction (17)
Map_infoPositivePositive_cloneF47B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-9.42344
ReferenceWBPaper00032965
WBPaper00062775
WBPaper00065331
MethodGene