WormBase Tree Display for Gene: WBGene00018340
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WBGene00018340 | SMap | S_parent | Sequence | F42A10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | anmt-2 | Person_evidence | WBPerson260 | |||||
Sequence_name | F42A10.3 | ||||||||
Molecular_name | F42A10.3 | ||||||||
F42A10.3.1 | |||||||||
CE29316 | |||||||||
Other_name | CELE_F42A10.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | anmt-2 | ||||||||
DB_info | Database | AceView | gene | 3H244 | |||||
WormQTL | gene | WBGene00018340 | |||||||
WormFlux | gene | WBGene00018340 | |||||||
NDB | locus_tag | CELE_F42A10.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018340|UniProtKB=Q20308 | |||||||
family | PTHR10867 | ||||||||
NCBI | gene | 175868 | |||||||
RefSeq | protein | NM_065933.10 | |||||||
TREEFAM | TREEFAM_ID | TF313114 | |||||||
TrEMBL | UniProtAcc | Q20308 | |||||||
UniProt_GCRP | UniProtAcc | Q20308 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 04 Sep 2012 12:07:47 | WBPerson2970 | Name_change | CGC_name | anmt-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | anmt | ||||||||
Allele (55) | |||||||||
Strain | WBStrain00037687 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00067773 | ||||||||
00067774 | |||||||||
00067775 | |||||||||
00123488 | |||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00011573 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015124 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable N-methyltransferase activity. Predicted to be located in cytosol. Expressed in pharyngeal muscle cell. Human ortholog(s) of this gene implicated in Alzheimer's disease; hypertension; multiple sclerosis; and renal cell carcinoma. Is an ortholog of human INMT (indolethylamine N-methyltransferase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9160) | ||||
DOID:7693 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7861) | ||||||
DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7861) | ||||||
DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9160) | ||||||
DOID:3393 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7861) | ||||||
DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9160) | ||||||
Molecular_info | Corresponding_CDS | F42A10.3 | |||||||
Corresponding_transcript | F42A10.3.1 | ||||||||
Other_sequence (34) | |||||||||
Associated_feature | WBsf666970 | ||||||||
WBsf666971 | |||||||||
WBsf992660 | |||||||||
WBsf992661 | |||||||||
WBsf992662 | |||||||||
WBsf1015040 | |||||||||
WBsf1015041 | |||||||||
WBsf226771 | |||||||||
Experimental_info | RNAi_result | WBRNAi00032117 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005464 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014791 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047056 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr92 | ||||||||
Expr431 | |||||||||
Expr1012884 | |||||||||
Expr1037896 | |||||||||
Expr1150919 | |||||||||
Expr2009339 | |||||||||
Expr2027575 | |||||||||
Drives_construct | WBCnstr00026599 | ||||||||
Construct_product | WBCnstr00026599 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (172) | |||||||||
Interaction (16) | |||||||||
Map_info | Map | III | Position | -1.41271 | |||||
Positive | Positive_clone | F42A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |