WormBase Tree Display for Gene: WBGene00018340
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WBGene00018340 | SMap | S_parent | Sequence | F42A10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | anmt | |||||
Allele (55) | ||||||
Strain | WBStrain00037687 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00067773 | |||||
00067774 | ||||||
00067775 | ||||||
00123488 | ||||||
Ortholog (33) | ||||||
Paralog | WBGene00011573 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00015124 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable N-methyltransferase activity. Predicted to be located in cytosol. Expressed in pharyngeal muscle cell. Human ortholog(s) of this gene implicated in Alzheimer's disease; hypertension; multiple sclerosis; and renal cell carcinoma. Is an ortholog of human INMT (indolethylamine N-methyltransferase). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9160) | |
DOID:7693 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7861) | |||
DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7861) | |||
DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9160) | |||
DOID:3393 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7861) | |||
DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9160) | |||
Molecular_info | Corresponding_CDS | F42A10.3 | ||||
Corresponding_transcript | F42A10.3.1 | |||||
Other_sequence (34) | ||||||
Associated_feature | WBsf666970 | |||||
WBsf666971 | ||||||
WBsf992660 | ||||||
WBsf992661 | ||||||
WBsf992662 | ||||||
WBsf1015040 | ||||||
WBsf1015041 | ||||||
WBsf226771 | ||||||
Experimental_info | RNAi_result | WBRNAi00032117 | Inferred_automatically | RNAi_primary | ||
WBRNAi00005464 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00014791 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00047056 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr92 | |||||
Expr431 | ||||||
Expr1012884 | ||||||
Expr1037896 | ||||||
Expr1150919 | ||||||
Expr2009339 | ||||||
Expr2027575 | ||||||
Drives_construct | WBCnstr00026599 | |||||
Construct_product | WBCnstr00026599 | |||||
Microarray_results (18) | ||||||
Expression_cluster (172) | ||||||
Interaction (16) | ||||||
Map_info | Map | III | Position | -1.41271 | ||
Positive | Positive_clone | F42A10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
WBPaper00065331 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |