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WormBase Tree Display for Gene: WBGene00018195

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Name Class

WBGene00018195SMapS_parentSequenceF39E9
IdentityVersion2
NameCGC_namebtb-16Person_evidenceWBPerson261
Sequence_nameF39E9.2
Molecular_nameF39E9.2
F39E9.2.1
CE32655
Other_nameCELE_F39E9.2Accession_evidenceNDBBX284602
Public_namebtb-16
DB_infoDatabaseAceViewgene2D587
WormQTLgeneWBGene00018195
WormFluxgeneWBGene00018195
NDBlocus_tagCELE_F39E9.2
PanthergeneCAEEL|WormBase=WBGene00018195|UniProtKB=O17112
familyPTHR22744
NCBIgene173674
RefSeqproteinNM_062098.6
TREEFAMTREEFAM_IDTF322195
TrEMBLUniProtAccO17112
UniProt_GCRPUniProtAccO17112
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
207 Nov 2007 11:51:23WBPerson2970Name_changeCGC_namebtb-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbtb
Allele (75)
RNASeq_FPKM (74)
OrthologWBGene00060626Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00060625Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00060783Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00038719Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00041941Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042305Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042316Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00042318Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00042405Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042406Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00066996Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00086314Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066969Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066970Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066975Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00086312Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066981Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00086299Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066990Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066991Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066988Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00065829Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00084610Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066986Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066987Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00066511Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00148403Caenorhabditis brenneriFrom_analysisOMA
WBGene00081572Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00190638Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00191345Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00164526Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00128902Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00084912Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00066980Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00094388Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00164812Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00039936Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041397Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222201Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9418Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP38.g15088Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g22058Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00246.g7812Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00443.g10913Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g828Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6100Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6809Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6901Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6902Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6978Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7067Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7106Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7108Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7109Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7116Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7655Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7656Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7658Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7659Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7660Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7661Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7662Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7663Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7664Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7665Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7666Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7667Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7668Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7669Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7682Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7683Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7684Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7732Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7734Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7737Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7740Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7745Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7750Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7778Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7779Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7782Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g9196Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g23119Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5769Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5770Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5771Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold608.g5794Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13906Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13907Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15985Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9482Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02172.g25225Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02752.g27801Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03159.g29263Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03159.g29264Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03159.g29265Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03280.g29661Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03447.g30231Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03482.g30338Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_004092Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004093Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004094Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004095Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004096Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004097Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004098Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004099Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004101Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004102Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004103Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004104Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_004233Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007458Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007460Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011368Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011369Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_021764Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g2692Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g3930Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00060790Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065966Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066512Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066971Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066972Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066973Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066974Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066976Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066977Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066978Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066979Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066982Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066983Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066984Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066989Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066992Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066993Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066994Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066995Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00067020Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068746Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00071550Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00076635Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077082Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084621Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084911Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00085421Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086300Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086306Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086323Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00247035Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00116330Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256306Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (29)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF39E9.2
Corresponding_CDS_historyF39E9.2:wp88
Corresponding_transcriptF39E9.2.1
Other_sequenceCR01799
CRC03531_1
Associated_featureWBsf644049
WBsf220998
Experimental_infoRNAi_resultWBRNAi00046776Inferred_automaticallyRNAi_primary
WBRNAi00014601Inferred_automaticallyRNAi_primary
WBRNAi00097119Inferred_automaticallyRNAi_primary
Expr_patternExpr1150651
Expr2009665
Expr2027904
Drives_constructWBCnstr00026708
Construct_productWBCnstr00026708
Microarray_results (13)
Expression_cluster (241)
Interaction (155)
Map_infoMapIIPosition-6.84748Error0.016437
PositivePositive_cloneF39E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene