WormBase Tree Display for Gene: WBGene00017961
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| WBGene00017961 | SMap | S_parent | Sequence | F31F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-180 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F31F4.12 | ||||||||
| Molecular_name | F31F4.12 | ||||||||
| F31F4.12.1 | |||||||||
| CE17736 | |||||||||
| Other_name | CELE_F31F4.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-180 | ||||||||
| DB_info | Database | AceView | gene | 5B144 | |||||
| WormQTL | gene | WBGene00017961 | |||||||
| WormFlux | gene | WBGene00017961 | |||||||
| NDB | locus_tag | CELE_F31F4.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017961|UniProtKB=O17131 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 185170 | |||||||
| RefSeq | protein | NM_070885.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315604 | |||||||
| TrEMBL | UniProtAcc | O17131 | |||||||
| UniProt_GCRP | UniProtAcc | O17131 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-180 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (122) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029373 | ||||||||
| 00029374 | |||||||||
| 00029375 | |||||||||
| 00029376 | |||||||||
| 00123225 | |||||||||
| 00123226 | |||||||||
| 00123227 | |||||||||
| 00123228 | |||||||||
| Ortholog (22) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F31F4.12 | |||||||
| Corresponding_transcript | F31F4.12.1 | ||||||||
| Associated_feature | WBsf652451 | ||||||||
| WBsf978524 | |||||||||
| WBsf233284 | |||||||||
| Transcription_factor | WBTranscriptionFactor000997 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014163 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031632 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046040 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046039 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114471 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7533 | ||||||||
| Expr1022094 | |||||||||
| Expr1149933 | |||||||||
| Expr2014082 | |||||||||
| Expr2032322 | |||||||||
| Drives_construct | WBCnstr00012678 | ||||||||
| WBCnstr00026885 | |||||||||
| Construct_product | WBCnstr00026885 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000336328 | ||||||||
| WBInteraction000534656 | |||||||||
| Map_info | Map | V | Position | -19.968 | |||||
| Positive | Positive_clone | F31F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5353 | |||||||
| 4342 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00057578 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
