WormBase Tree Display for Gene: WBGene00017961
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WBGene00017961 | SMap | S_parent | Sequence | F31F4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nhr-180 | Person_evidence | WBPerson600 | |||
Sequence_name | F31F4.12 | ||||||
Molecular_name | F31F4.12 | ||||||
F31F4.12.1 | |||||||
CE17736 | |||||||
Other_name | CELE_F31F4.12 | Accession_evidence | NDB | BX284605 | |||
Public_name | nhr-180 | ||||||
DB_info | Database | AceView | gene | 5B144 | |||
WormQTL | gene | WBGene00017961 | |||||
WormFlux | gene | WBGene00017961 | |||||
NDB | locus_tag | CELE_F31F4.12 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017961|UniProtKB=O17131 | |||||
family | PTHR45680 | ||||||
NCBI | gene | 185170 | |||||
RefSeq | protein | NM_070885.3 | |||||
TREEFAM | TREEFAM_ID | TF315604 | |||||
TrEMBL | UniProtAcc | O17131 | |||||
UniProt_GCRP | UniProtAcc | O17131 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (122) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00029373 | ||||||
00029374 | |||||||
00029375 | |||||||
00029376 | |||||||
00123225 | |||||||
00123226 | |||||||
00123227 | |||||||
00123228 | |||||||
Ortholog (22) | |||||||
Paralog (218) | |||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F31F4.12 | |||||
Corresponding_transcript | F31F4.12.1 | ||||||
Associated_feature | WBsf652451 | ||||||
WBsf978524 | |||||||
WBsf233284 | |||||||
Transcription_factor | WBTranscriptionFactor000997 | ||||||
Experimental_info | RNAi_result | WBRNAi00014163 | Inferred_automatically | RNAi_primary | |||
WBRNAi00031632 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046040 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046039 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00114471 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr7533 | ||||||
Expr1022094 | |||||||
Expr1149933 | |||||||
Expr2014082 | |||||||
Expr2032322 | |||||||
Drives_construct | WBCnstr00012678 | ||||||
WBCnstr00026885 | |||||||
Construct_product | WBCnstr00026885 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (137) | |||||||
Interaction | WBInteraction000336328 | ||||||
WBInteraction000534656 | |||||||
Map_info | Map | V | Position | -19.968 | |||
Positive | Positive_clone | F31F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5353 | |||||
4342 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00057578 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |