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WormBase Tree Display for Gene: WBGene00017775

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Name Class

WBGene00017775SMapS_parentSequenceF25B5
IdentityVersion1
NameSequence_nameF25B5.3
Molecular_name (15)
Other_nameCELE_F25B5.3Accession_evidenceNDBBX284603
Public_nameF25B5.3
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (67)
StrainWBStrain00002336
WBStrain00047567
WBStrain00047568
RNASeq_FPKM (74)
GO_annotation (14)
Ortholog (42)
ParalogWBGene00012423Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionF25B5.3 is orthologous to the human gene NUCLEOTIDASE, 5-PRIME, CYTOSOLIC III (NT5C3; OMIM:606224), which when mutated leads to hemolytic anemia due to UMPH1 deficiencyCurator_confirmedWBPerson1823
WBPerson567
Date_last_updated09 Aug 2004 00:00:00
Automated_descriptionPredicted to enable 5'-nucleotidase activity. Predicted to be involved in nucleotide metabolic process. Predicted to be located in cytoplasm. Is an ortholog of human NT5C3A (5'-nucleotidase, cytosolic IIIA).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF25B5.3a
F25B5.3b
F25B5.3c
F25B5.3d
F25B5.3e
Corresponding_transcriptF25B5.3a.1
F25B5.3b.1
F25B5.3c.1
F25B5.3d.1
F25B5.3e.1
Other_sequence (44)
Associated_feature (13)
Experimental_infoRNAi_resultWBRNAi00045475Inferred_automaticallyRNAi_primary
WBRNAi00001375Inferred_automaticallyRNAi_primary
WBRNAi00013853Inferred_automaticallyRNAi_primary
WBRNAi00031355Inferred_automaticallyRNAi_primary
WBRNAi00005627Inferred_automaticallyRNAi_primary
Expr_patternChronogram420
Expr1013296
Expr1037638
Expr1149394
Expr2002947
Expr2021163
Drives_constructWBCnstr00003005
WBCnstr00027028
Construct_productWBCnstr00027028
Microarray_results (49)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038118:stress_upregulated_N2
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046024:sleep_upregulated_oscillating
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_downregulated_protein
WBPaper00048611:MnCl2_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049905:Age_variant_expression
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053039:Aspirin_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
WBPaper00056275:P.aeruginosa_downregulated_pmk-1(km25)_dependent
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057068:Cadmium_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059739:hira-1(gk835598)_downregulated_L4
WBPaper00059763:neuron_expressed
WBPaper00059895:wounding_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061340:Z1_Z4
WBPaper00061527:tars-1-AFFX-r2-3026-5_at
WBPaper00061651:AFD_enriched
WBPaper00061651:VA12_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062237:dnj-21(RNAi)_downregulated_protein
WBPaper00062293:isp-1(qm150)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_upregulated_AFD
WBPaper00065158:AFD_depleted
WBPaper00065225:nhr-42(tm1375)_downregulated_S.aureus-infected
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065841:21_0
WBPaper00065841:21_1
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
WBPaper00065993:glp-1(e2141)_upregulated
cgc4386_cluster_2_3
cgc4489_group_25
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025032:cluster_1
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_E
WBPaper00026980:intestine_enriched
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00034739:N2moreDR1350
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00037113:CPF_16C_down-regulated
WBPaper00037113:Diazinon_16C_regulated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(41_min)
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:Cluster_C
InteractionWBInteraction000227667
WBInteraction000326278
WBInteraction000398405
Map_infoPositivePositive_cloneF25B5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.43006
ReferenceWBPaper00038491
WBPaper00055090
MethodGene