Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00017574

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00017574SMapS_parentSequenceF18F11
IdentityVersion2
NameCGC_namepxmp-4Person_evidenceWBPerson7169
WBPerson117
Sequence_nameF18F11.1
Molecular_nameF18F11.1
F18F11.1.1
CE17684
Other_nameCELE_F18F11.1Accession_evidenceNDBBX284604
Public_namepxmp-4
DB_infoDatabaseAceViewgene4B88
WormQTLgeneWBGene00017574
WormFluxgeneWBGene00017574
NDBlocus_tagCELE_F18F11.1
PanthergeneCAEEL|WormBase=WBGene00017574|UniProtKB=P91262
familyPTHR15460
NCBIgene184650
RefSeqproteinNM_067506.6
TREEFAMTREEFAM_IDTF105313
TrEMBLUniProtAccP91262
UniProt_GCRPUniProtAccP91262
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
215 Jul 2019 14:29:07WBPerson1983Name_changeCGC_namepxmp-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpxmp
Allele (36)
StrainWBStrain00001908
WBStrain00002310
RNASeq_FPKM (74)
GO_annotation00050384
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be located in peroxisomal membrane. Expressed in head. Is an ortholog of human PXMP4 (peroxisomal membrane protein 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF18F11.1
Corresponding_transcriptF18F11.1.1
Other_sequence (31)
Associated_featureWBsf995123
WBsf1016537
WBsf1016538
WBsf229674
WBsf229675
Experimental_infoRNAi_resultWBRNAi00111514Inferred_automaticallyRNAi_primary
WBRNAi00031108Inferred_automaticallyRNAi_primary
WBRNAi00013521Inferred_automaticallyRNAi_primary
WBRNAi00044962Inferred_automaticallyRNAi_primary
WBRNAi00111518Inferred_automaticallyRNAi_primary
WBRNAi00111510Inferred_automaticallyRNAi_primary
Expr_patternChronogram1571
Expr5790
Expr5791
Expr1013738
Expr1148932
Expr2002720
Expr2020936
Drives_constructWBCnstr00002697
WBCnstr00004398
WBCnstr00027195
Construct_productWBCnstr00027195
Microarray_results (19)
Expression_clusterWBPaper00029359_1280
WBPaper00029359_1444
WBPaper00029359_1504
WBPaper00029359_1604
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00046509:lin-35(n745)_downregulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048988:neuron_expressed
WBPaper00049334:CE_intestine_enriched
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055364:uaf-1(n4588)_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056826:hmc_biased
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059839:S.maltophilia_regulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061527:F54D5.3_7003-F54D5.3_7004
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062456:doxycycline_upregulated_CB4856_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
cgc4386_cluster_1_5
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_C
WBPaper00036383:ash-2_Day8_regulated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(143_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(143_min)
InteractionWBInteraction000165222
WBInteraction000306928
WBInteraction000362036
WBInteraction000402099
WBInteraction000437278
WBInteraction000461447
Map_infoPositivePositive_cloneF18F11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-26.4758
ReferenceWBPaper00038491
WBPaper00055090
MethodGene