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WormBase Tree Display for Gene: WBGene00017548

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Name Class

WBGene00017548SMapS_parentSequenceF18A1
IdentityVersion1
NameSequence_nameF18A1.7
Molecular_nameF18A1.7
F18A1.7.1
CE32628
Other_nameCELE_F18A1.7Accession_evidenceNDBBX284602
Public_nameF18A1.7
DB_infoDatabaseAceViewgene2H952
WormQTLgeneWBGene00017548
WormFluxgeneWBGene00017548
NDBlocus_tagCELE_F18A1.7
PanthergeneCAEEL|WormBase=WBGene00017548|UniProtKB=Q19536
familyPTHR37442
NCBIgene174237
RefSeqproteinNM_063204.10
TREEFAMTREEFAM_IDTF351625
TrEMBLUniProtAccQ19536
UniProt_GCRPUniProtAccQ19536
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
Contained_in_operonCEOP2668
OrthologWBGene00127259Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00033863Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
WormBase-Compara
WBGene00054407Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00151115Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00148950Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00119866Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00017548Caenorhabditis elegansFrom_analysisInparanoid_8
Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00104446Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00192257Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193730Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g7106Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10549Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16568Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g205Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12555Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18111Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1565Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16083Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17129Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00465.g11171Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F18A1.7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12318Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00425.g11203Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09757Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006569Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00018Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12303Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12676Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20249300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5069Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00015677Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionExpressed in germ line. Is predicted to encode a protein with the following domain: Chondroitin proteoglycan 4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF18A1.7
Corresponding_CDS_historyF18A1.7:wp88
Corresponding_transcriptF18A1.7.1
Other_sequence (15)
Associated_featureWBsf655372
WBsf665717
WBsf665718
WBsf976491
WBsf976492
WBsf976493
WBsf988521
WBsf1012576
WBsf223366
WBsf223367
Experimental_infoRNAi_resultWBRNAi00007845Inferred_automaticallyRNAi_primary
WBRNAi00103288Inferred_automaticallyRNAi_primary
WBRNAi00013485Inferred_automaticallyRNAi_primary
WBRNAi00001379Inferred_automaticallyRNAi_primary
WBRNAi00044912Inferred_automaticallyRNAi_primary
Expr_patternExpr4112
Expr1018486
Expr1037535
Expr1148882
Expr2002702
Expr2020918
Drives_constructWBCnstr00027216
Construct_productWBCnstr00027216
Microarray_results (21)
Expression_cluster (232)
Interaction (244)
Map_infoPositivePositive_cloneF18A1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.508051
MethodGene