WormBase Tree Display for CDS: F18A1.7
expand all nodes | collapse all nodes | view schema
| F18A1.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F18A1 | |||
| Structure | Source_exons | 1 | 118 | |||
| 166 | 468 | |||||
| 517 | 784 | |||||
| 835 | 946 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q19536 | ||
| UniProt | UniProtAcc | Q19536 | ||||
| UniProt_GCRP | UniProtAcc | Q19536 | ||||
| AlphaFold | entry | Q19536 | ||||
| NCBI_protein | GI_number | GI:351018140 | ||||
| TREEFAM | TREEFAM_ID | TF351625 | ||||
| Protein_id | CHROMOSOME_II | CCD62045 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF15481 (Chondroitin proteoglycan 4); contains similarity to Interpro domain IPR029153 (Chondroitin proteoglycan 4) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00017548 | ||||
| Corresponding_transcript | F18A1.7.1 | |||||
| Corresponding_protein | CE32628 | |||||
| Corresponding_PCR_product | cenix:12-a9 | |||||
| mv_F18A1.7 | ||||||
| sjj_F18A1.7 | ||||||
| Corresponding_oligo_set (20) | ||||||
| Matching_cDNA (64) | ||||||
| RNAi_result | WBRNAi00007845 | |||||
| WBRNAi00103288 | ||||||
| WBRNAi00013485 | ||||||
| WBRNAi00001379 | ||||||
| WBRNAi00044912 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | Chondroitin proteoglycan 4 domain-containing protein | Accession_evidence | UniProt | TR:Q19536 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf009544 | |||||
| Method | curated |
