WormBase Tree Display for Gene: WBGene00017514

WBGene00017514 SMap: S_parent: Sequence: F16F9
  Identity: Version: 1
    Name: Sequence_name: F16F9.3
      Molecular_name: F16F9.3
        F16F9.3.1
        CE41792
      Other_name: CELE_F16F9.3 Accession_evidence: NDB BX284606
      Public_name: F16F9.3
    DB_info: Database: AceView gene XJ77
        WormQTL gene WBGene00017514
        WormFlux gene WBGene00017514
        NDB locus_tag CELE_F16F9.3
        NCBI gene 184574
        RefSeq protein NM_001129661.5
        TrEMBL UniProtAcc A8WFM7
        UniProt_GCRP UniProtAcc A8WFM7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00510724
      WBVar00510725
      WBVar00510726
      WBVar01470138
      WBVar02148249
      WBVar02151082
      WBVar01816220
      WBVar01527091
      WBVar01885385
      WBVar01885386
      WBVar01885387
      WBVar01499963
      WBVar01885388
      WBVar01885389
      WBVar01499781
      WBVar01885390
      WBVar01885391
      WBVar01885392
      WBVar01500168
      WBVar01500169
      WBVar01499642
      WBVar01500012
      WBVar01167745
      WBVar01167746
      WBVar01167747
      WBVar01167748
      WBVar01167749
      WBVar01167750
      WBVar01167751
      WBVar01167752
      WBVar01550695
      WBVar01167753
      WBVar01167754
      WBVar01167755
      WBVar01167756
      WBVar01167757
      WBVar01167758
      WBVar01167759
      WBVar01167760
      WBVar01167761
      WBVar01167762
      WBVar01167763
      WBVar00510720
      WBVar01498960
      WBVar00510721
      WBVar00510722
      WBVar00302467
      WBVar01500067
      WBVar00510723
    RNASeq_FPKM (74)
    Ortholog (21)
    Structured_description: Automated_description: Expressed in amphid sheath cell and phasmid sheath cell. Is predicted to encode a protein with the following domain: EF-hand domain pair. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F16F9.3
    Corresponding_CDS_history: F16F9.3:wp184
      F16F9.3a:wp271
    Corresponding_transcript: F16F9.3.1
    Associated_feature: WBsf1023420
  Experimental_info: RNAi_result: WBRNAi00044807 Inferred_automatically: RNAi_primary
      WBRNAi00031042 Inferred_automatically: RNAi_primary
      WBRNAi00013412 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12750
      Expr1013249
      Expr1148772
      Expr2002659
      Expr2020876
    Drives_construct: WBCnstr00005412
      WBCnstr00005413
      WBCnstr00007440
      WBCnstr00007876
      WBCnstr00007877
      WBCnstr00008100
      WBCnstr00008101
      WBCnstr00009528
      WBCnstr00021639
      WBCnstr00041737
    Microarray_results (20)
    Expression_cluster: WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:hypodermis_enriched
      WBPaper00050990:hypodermis_expressed
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055137:S.maltophilia_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:AMsh
      WBPaper00061340:AMso
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061527:172183_at-176110_at
      WBPaper00061651:AMsh_enriched
      WBPaper00061651:PHsh_enriched
      WBPaper00061853:tunicamycin_downregulated_N2
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065841:45_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00035560:ahr-1_downregulated
      WBPaper00036286:Pattern_C
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040876:mir-35_downregulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction: WBInteraction000306970
  Map_info: Positive: Positive_clone: F16F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 0.00310342
  Method: Gene