WormBase Tree Display for Gene: WBGene00017514

WBGene00017514 SMap: S_parent: Sequence: F16F9
  Identity: Version: 1
    Name: Sequence_name: F16F9.3
      Molecular_name: F16F9.3
        F16F9.3.1
        CE41792
      Other_name: CELE_F16F9.3 Accession_evidence: NDB BX284606
      Public_name: F16F9.3
    DB_info: Database: AceView gene XJ77
        WormQTL gene WBGene00017514
        WormFlux gene WBGene00017514
        NDB locus_tag CELE_F16F9.3
        NCBI gene 184574
        RefSeq protein NM_001129661.5
        TrEMBL UniProtAcc A8WFM7
        UniProt_GCRP UniProtAcc A8WFM7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (49)
    RNASeq_FPKM (74)
    Ortholog (21)
    Structured_description: Automated_description: Expressed in amphid sheath cell and phasmid sheath cell. Is predicted to encode a protein with the following domain: EF-hand domain pair. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F16F9.3
    Corresponding_CDS_history: F16F9.3:wp184
      F16F9.3a:wp271
    Corresponding_transcript: F16F9.3.1
    Associated_feature: WBsf1023420
  Experimental_info: RNAi_result: WBRNAi00044807 Inferred_automatically: RNAi_primary
      WBRNAi00031042 Inferred_automatically: RNAi_primary
      WBRNAi00013412 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12750
      Expr1013249
      Expr1148772
      Expr2002659
      Expr2020876
    Drives_construct: WBCnstr00005412
      WBCnstr00005413
      WBCnstr00007440
      WBCnstr00007876
      WBCnstr00007877
      WBCnstr00008100
      WBCnstr00008101
      WBCnstr00009528
      WBCnstr00021639
      WBCnstr00041737
    Microarray_results (20)
    Expression_cluster: WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:hypodermis_enriched
      WBPaper00050990:hypodermis_expressed
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055137:S.maltophilia_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:AMsh
      WBPaper00061340:AMso
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061527:172183_at-176110_at
      WBPaper00061651:AMsh_enriched
      WBPaper00061651:PHsh_enriched
      WBPaper00061853:tunicamycin_downregulated_N2
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065841:45_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00035560:ahr-1_downregulated
      WBPaper00036286:Pattern_C
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040876:mir-35_downregulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction: WBInteraction000306970
  Map_info: Positive: Positive_clone: F16F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 0.00310342
  Method: Gene