WormBase Tree Display for Gene: WBGene00017471
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WBGene00017471 | SMap | S_parent | Sequence | F14H12 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (25) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (25) | ||||||
Paralog | WBGene00003252 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00011880 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00016468 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00017376 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Enriched in several structures, including ABplpaaaap; FLP; VC neuron; amphid socket cell; and arc ant V based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-two chemicals including methylmercuric chloride; Mercuric Chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F14H12.3 | ||||
Corresponding_transcript | F14H12.3.1 | |||||
Other_sequence | CJC11178_1 | |||||
Associated_feature | WBsf1004909 | |||||
WBsf235571 | ||||||
Experimental_info | RNAi_result | WBRNAi00013314 | Inferred_automatically | RNAi_primary | ||
WBRNAi00044645 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00001297 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00030964 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1028937 | |||||
Expr1148617 | ||||||
Expr2002591 | ||||||
Expr2020807 | ||||||
Drives_construct | WBCnstr00027272 | |||||
Construct_product | WBCnstr00027272 | |||||
Microarray_results (19) | ||||||
Expression_cluster (240) | ||||||
Interaction (16) | ||||||
Map_info | Positive | Positive_clone | F14H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | -7.7743 | ||||
Reference | WBPaper00055090 | |||||
WBPaper00065331 | ||||||
Method | Gene |