WormBase Tree Display for CDS: F14H12.3
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| F14H12.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F14H12 | |||
| Structure | Source_exons | 1 | 37 | |||
| 129 | 251 | |||||
| 479 | 620 | |||||
| 706 | 835 | |||||
| 884 | 967 | |||||
| 1034 | 1291 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q966K7 | ||
| UniProt | UniProtAcc | Q966K7 | ||||
| UniProt_GCRP | UniProtAcc | Q966K7 | ||||
| AlphaFold | entry | Q966K7 | ||||
| NCBI_protein | GI_number | GI:351050796 | ||||
| TREEFAM | TREEFAM_ID | TF344185 | ||||
| Protein_id | CHROMOSOME_X | CCD65401 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00090 (Thrombospondin type 1 domain); contains similarity to Interpro domains IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR000884 (Thrombospondin type-1 (TSP1) repeat) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00017471 | ||||
| Corresponding_transcript | F14H12.3.1 | |||||
| Corresponding_protein | CE07063 | |||||
| Corresponding_PCR_product | cenix:31-b8 | |||||
| mv_F14H12.3 | ||||||
| sjj_F14H12.3 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (16) | ||||||
| RNAi_result | WBRNAi00013314 | |||||
| WBRNAi00044645 | ||||||
| WBRNAi00001297 | ||||||
| WBRNAi00030964 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Thrombospondin type 1 domain protein | Accession_evidence | UniProt | TR:Q966K7 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
