WormBase Tree Display for Gene: WBGene00017422
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WBGene00017422 | SMap | S_parent | Sequence | F13C5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (46) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (20) | ||||||
Structured_description | Concise_description | F13C5.1 encodes a novel protein with two predicted transmembrane domains; the protein product of F13C5.1 is most closely related to proteins from other nematode species and does not appear to have close homologs in more distantly related organisms. | Curator_confirmed | WBPerson1843 | ||
Date_last_updated | 31 Oct 2008 00:00:00 | |||||
Automated_description | Enriched in head mesodermal cell; neurons; and retrovesicular ganglion based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on RNA-seq and microarray studies. Is affected by fifteen chemicals including methylmercuric chloride; 4-bromodiphenyl ether; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F13C5.1 | ||||
Corresponding_CDS_history | F13C5.1:wp226 | |||||
Corresponding_transcript | F13C5.1.1 | |||||
F13C5.1.2 | ||||||
Other_sequence | CJC10730_1 | |||||
EX914778.1 | ||||||
HBC15058_1 | ||||||
CJC10728_1 | ||||||
CRC03578_1 | ||||||
Oden_isotig27903 | ||||||
CR01283 | ||||||
Tcol_isotig17126 | ||||||
Associated_feature | WBsf647790 | |||||
WBsf662420 | ||||||
WBsf662421 | ||||||
WBsf716843 | ||||||
WBsf1003816 | ||||||
WBsf1003817 | ||||||
WBsf1003818 | ||||||
WBsf1022149 | ||||||
Experimental_info | RNAi_result | WBRNAi00082435 | Inferred_automatically | RNAi_primary | ||
WBRNAi00013202 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00102786 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00052134 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082699 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00000673 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1017807 | |||||
Expr1037492 | ||||||
Expr1148439 | ||||||
Expr2002501 | ||||||
Expr2020719 | ||||||
Microarray_results (21) | ||||||
Expression_cluster (187) | ||||||
Interaction | WBInteraction000211268 | |||||
WBInteraction000301643 | ||||||
WBInteraction000427810 | ||||||
WBInteraction000431279 | ||||||
Map_info | Positive | Positive_clone | F13C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | -19.5753 | ||||
Method | Gene |