WormBase Tree Display for Gene: WBGene00016903

WBGene00016903 SMap: S_parent: Sequence: C53D5
  Identity: Version: 3
    Name: CGC_name: marc-4 Person_evidence: WBPerson499
      Sequence_name: C53D5.2
      Molecular_name: C53D5.2
        C53D5.2.1
        CE52621
      Other_name: CELE_C53D5.2 Accession_evidence: NDB BX284601
      Public_name: marc-4
    DB_info: Database: AceView gene 1A759
        WormQTL gene WBGene00016903
        WormFlux gene WBGene00016903
        NDB locus_tag CELE_C53D5.2
        Panther gene CAEEL|WormBase=WBGene00016903|UniProtKB=Q9N5V7
          family PTHR45981
        NCBI gene 171616
        RefSeq protein NM_001361855.4
        TrEMBL UniProtAcc Q9N5V7
        UniProt_GCRP UniProtAcc Q9N5V7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Jan 2013 14:59:12 WBPerson2970 Name_change: CGC_name: marc-4
        3 21 Nov 2019 16:12:41 WBPerson4025 Event: Acquires_merge: WBGene00016904
      Acquires_merge: WBGene00016904
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: marc
    Allele: WBVar00296827
      WBVar01711281
      WBVar01711282
      WBVar01711283
      WBVar01711284
      WBVar01711285
      WBVar00147143
      WBVar00147144
      WBVar00002761
      WBVar00069599
      WBVar00323811
      WBVar00323812
      WBVar00323813
      WBVar00002771
      WBVar00323814
      WBVar00323815
      WBVar00323816
      WBVar00002776
      WBVar00323817
      WBVar00323818
      WBVar00323819
      WBVar00002781
      WBVar01835297
      WBVar00323820
      WBVar00323821
      WBVar00323822
      WBVar00002786
      WBVar00002791
      WBVar01639923
      WBVar01639924
      WBVar01639925
      WBVar01680496
      WBVar01402989
      WBVar01429748
      WBVar01429749
      WBVar01429750
      WBVar02028052
      WBVar00250700
      WBVar01499786
      WBVar02074978
      WBVar01499605
      WBVar02088489
      WBVar01499619
      WBVar00243820
      WBVar00243821
      WBVar01955551
      WBVar00243822
      WBVar00303874
      WBVar02015676
      WBVar01929868
      WBVar00532243
      WBVar00532244
      WBVar00532245
      WBVar01761504
      WBVar02125889
      WBVar02125890
      WBVar01529592
      WBVar01529593
      WBVar00606027
      WBVar01529594
      WBVar00606028
      WBVar01529595
      WBVar00606029
      WBVar01529596
      WBVar00606030
      WBVar00606031
      WBVar02121679
      WBVar00606032
      WBVar00606033
      WBVar00606034
      WBVar00606035
      WBVar00606036
      WBVar00606037
      WBVar00606038
      WBVar00606039
      WBVar00606040
      WBVar00606041
      WBVar00606042
      WBVar00606043
      WBVar00606044
      WBVar00606045
      WBVar00606046
      WBVar00606047
      WBVar00606048
      WBVar00606049
      WBVar00606050
      WBVar00606051
      WBVar00606052
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (42)
    Paralog: WBGene00007643 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00013273 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00077696 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00008433 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable MHC protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in antigen processing and presentation of peptide antigen via MHC class II; immune response; and protein polyubiquitination. Predicted to be located in early endosome membrane; late endosome membrane; and lysosome. Is an ortholog of human MARCHF1 (membrane associated ring-CH-type finger 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C53D5.2
    Corresponding_CDS_history: C53D5.2:wp102
      C53D5.2:wp263
      C53D5.2:wp274
    Corresponding_transcript: C53D5.2.1
    Other_sequence: Dviv_isotig30635
      Oden_isotig21417
      Acan_isotig02864
      Acan_isotig02863
      CJC06734_1
    Associated_feature: WBsf643007
      WBsf217116
  Experimental_info: RNAi_result: WBRNAi00043093 Inferred_automatically: RNAi_primary
      WBRNAi00094746 Inferred_automatically: RNAi_primary
      WBRNAi00043094 Inferred_automatically: RNAi_primary
      WBRNAi00003218 Inferred_automatically: RNAi_primary
      WBRNAi00030115 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012443
      Expr1029131
      Expr1037252
      Expr1037253
      Expr1147057
      Expr1147058
      Expr2001893
      Expr2013385
      Expr2020118
      Expr2031617
    Drives_construct: WBCnstr00027714
      WBCnstr00027715
    Construct_product: WBCnstr00027714
      WBCnstr00027715
    Microarray_results (35)
    Expression_cluster (186)
    Interaction: WBInteraction000547589
  Map_info: Map: I Position: -19.1103
    Positive: Positive_clone: C53D5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027315
    WBPaper00038491
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene