WormBase Tree Display for Gene: WBGene00013273

WBGene00013273 SMap: S_parent: Sequence: Y57A10B
  Identity: Version: 3
    Name: CGC_name: marc-5 Person_evidence: WBPerson499
      Sequence_name: Y57A10B.1
      Molecular_name: Y57A10B.1
        Y57A10B.1.1
        CE53818
      Other_name: CELE_Y57A10B.1 Accession_evidence: NDB BX284602
      Public_name: marc-5
    DB_info: Database: AceView gene 2M650
        WormQTL gene WBGene00013273
        WormFlux gene WBGene00013273
        NDB locus_tag CELE_Y57A10B.1
        Panther gene CAEEL|WormBase=WBGene00013273|UniProtKB=Q9XWI0
          family PTHR45981
        NCBI gene 174876
        RefSeq protein NM_064223.9
        TrEMBL UniProtAcc Q9XWI0
        UniProt_GCRP UniProtAcc Q9XWI0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Jan 2013 14:59:12 WBPerson2970 Name_change: CGC_name: marc-5
        3 21 Nov 2019 16:12:41 WBPerson4025 Event: Acquires_merge: WBGene00013274
      Acquires_merge: WBGene00013274
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: marc
    Allele (531)
    Strain: WBStrain00055486
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (37)
    Paralog: WBGene00007643 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00016903 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00077696 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00008433 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable MHC protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in antigen processing and presentation of peptide antigen via MHC class II; immune response; and protein polyubiquitination. Predicted to be located in early endosome membrane; late endosome membrane; and lysosome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y57A10B.1
    Corresponding_CDS_history: Y57A10B.1:wp109
      Y57A10B.1:wp274
    Corresponding_transcript: Y57A10B.1.1
    Other_sequence (21)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00057644 Inferred_automatically: RNAi_primary
      WBRNAi00094795 Inferred_automatically: RNAi_primary
      WBRNAi00024244 Inferred_automatically: RNAi_primary
      WBRNAi00021106 Inferred_automatically: RNAi_primary
      WBRNAi00021105 Inferred_automatically: RNAi_primary
      WBRNAi00057643 Inferred_automatically: RNAi_primary
      WBRNAi00037577 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015413
      Expr1021430
      Expr1161051
      Expr1161052
      Expr2008025
      Expr2013386
      Expr2026266
      Expr2031618
    Microarray_results (31)
    Expression_cluster (164)
    Interaction (15)
  Map_info: Map: II Position: 9.67684
    Positive: Positive_clone: Y57A10B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027315
    WBPaper00038491
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene