WormBase Tree Display for Gene: WBGene00016670

WBGene00016670 SMap: S_parent: Sequence: C45G7
  Identity: Version: 2
    Name: CGC_name: ilys-3 Person_evidence: WBPerson2531
      Sequence_name: C45G7.3
      Molecular_name: C45G7.3
        C45G7.3.1
        CE24850
      Other_name: CELE_C45G7.3 Accession_evidence: NDB BX284604
      Public_name: ilys-3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: ilys-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ilys
    Allele (30)
    Strain: WBStrain00037363
      WBStrain00004732
      WBStrain00004740
      WBStrain00004741
    RNASeq_FPKM (74)
    GO_annotation (26)
    Ortholog: WBGene00095824 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00093935 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144544 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00135417 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00045454 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00112344 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223222 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g14919 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g2457 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP31.g26495 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g19014 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00071.g3386 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_07810.g21122 Caenorhabditis angaria From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01029 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12883 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16667 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g9806 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241178 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00276481 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280855 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00264201 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0034162 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0046999 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0034165 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0035734 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0025827 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
    Paralog: WBGene00016668 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016669 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00017691 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00016958 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020982 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables lysozyme activity. Involved in antibacterial innate immune response and defense response to Gram-positive bacterium. Located in late endosome lumen; lysosomal lumen; and recycling endosome lumen. Expressed in coelomocyte; hypodermis; intestinal cell; and terminal bulb. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C45G7.3
    Corresponding_transcript: C45G7.3.1
    Other_sequence (13)
    Associated_feature: WBsf228023
  Experimental_info: RNAi_result: WBRNAi00092215 Inferred_automatically: RNAi_primary
      WBRNAi00011984 Inferred_automatically: RNAi_primary
      WBRNAi00070080 Inferred_automatically: RNAi_primary
      WBRNAi00000480 Inferred_automatically: RNAi_primary
      WBRNAi00029837 Inferred_automatically: RNAi_primary
      WBRNAi00042538 Inferred_automatically: RNAi_primary
      WBRNAi00092218 Inferred_automatically: RNAi_primary
      WBRNAi00078253 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9963
      Expr13079
      Expr13080
      Expr1014535
      Expr1146525
      Expr2030958
    Drives_construct: WBCnstr00014976
      WBCnstr00015097
      WBCnstr00027901
      WBCnstr00038029
      WBCnstr00038573
    Construct_product: WBCnstr00027901
    Microarray_results (16)
    Expression_cluster (284)
    Interaction (23)
    WBProcess: WBbiopr:00000008
  Map_info: Map: IV Position: -7.42586 Error: 0.019843
    Positive: Positive_clone: C45G7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene