WormBase Tree Display for Gene: WBGene00016174
expand all nodes | collapse all nodes | view schema
WBGene00016174 | SMap | S_parent | Sequence | C27H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mfsd-13.2 | |||||||
Sequence_name | C27H5.4 | ||||||||
Molecular_name | C27H5.4a | ||||||||
C27H5.4a.1 | |||||||||
CE50636 | |||||||||
C27H5.4b | |||||||||
CE50643 | |||||||||
C27H5.4c | |||||||||
CE50561 | |||||||||
C27H5.4b.1 | |||||||||
C27H5.4c.1 | |||||||||
Other_name | CELE_C27H5.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | mfsd-13.2 | ||||||||
DB_info | Database | AceView | gene | 2H454 | |||||
WormQTL | gene | WBGene00016174 | |||||||
WormFlux | gene | WBGene00016174 | |||||||
NDB | locus_tag | CELE_C27H5.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016174|UniProtKB=H2KZ27 | |||||||
family | PTHR28658 | ||||||||
NCBI | gene | 174177 | |||||||
RefSeq | protein | NM_001026826.5 | |||||||
NM_001026827.3 | |||||||||
NM_001313590.3 | |||||||||
TREEFAM | TREEFAM_ID | TF313122 | |||||||
TrEMBL | UniProtAcc | H2KZ27 | |||||||
A0A0K3ATW7 | |||||||||
Q7YZG1 | |||||||||
UniProt_GCRP | UniProtAcc | H2KZ27 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 30 Mar 2020 18:05:36 | WBPerson1983 | Name_change | CGC_name | mfsd-13.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mfsd | ||||||||
Allele (49) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00001182 | ||||||||
Ortholog (30) | |||||||||
Paralog | WBGene00017886 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human MFSD13A (major facilitator superfamily domain containing 13A). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C27H5.4a | |||||||
C27H5.4b | |||||||||
C27H5.4c | |||||||||
Corresponding_CDS_history | C27H5.4a:wp247 | ||||||||
C27H5.4b:wp247 | |||||||||
Corresponding_transcript | C27H5.4a.1 | ||||||||
C27H5.4b.1 | |||||||||
C27H5.4c.1 | |||||||||
Other_sequence | Hbac_isotig07375 | ||||||||
BU585584.1 | |||||||||
CRC09987_1 | |||||||||
CR08260 | |||||||||
Associated_feature | WBsf650211 | ||||||||
WBsf988370 | |||||||||
WBsf1012493 | |||||||||
WBsf223302 | |||||||||
Experimental_info | RNAi_result | WBRNAi00011276 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027191 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070158 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00085771 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013061 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024657 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029284 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041375 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023564 | ||||||||
Expr1145409 | |||||||||
Expr2001186 | |||||||||
Expr2019408 | |||||||||
Drives_construct | WBCnstr00028272 | ||||||||
Construct_product | WBCnstr00028272 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (194) | |||||||||
Interaction (50) | |||||||||
Map_info | Map | II | Position | 0.496398 | |||||
Positive | Positive_clone | C27H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |