WormBase Tree Display for Gene: WBGene00016174
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| WBGene00016174 | SMap | S_parent | Sequence | C27H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mfsd-13.2 | |||||||
| Sequence_name | C27H5.4 | ||||||||
| Molecular_name | C27H5.4a | ||||||||
| C27H5.4a.1 | |||||||||
| CE50636 | |||||||||
| C27H5.4b | |||||||||
| CE50643 | |||||||||
| C27H5.4c | |||||||||
| CE50561 | |||||||||
| C27H5.4b.1 | |||||||||
| C27H5.4c.1 | |||||||||
| Other_name | CELE_C27H5.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | mfsd-13.2 | ||||||||
| DB_info | Database | AceView | gene | 2H454 | |||||
| WormQTL | gene | WBGene00016174 | |||||||
| WormFlux | gene | WBGene00016174 | |||||||
| NDB | locus_tag | CELE_C27H5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016174|UniProtKB=H2KZ27 | |||||||
| family | PTHR28658 | ||||||||
| NCBI | gene | 174177 | |||||||
| RefSeq | protein | NM_001026826.5 | |||||||
| NM_001026827.3 | |||||||||
| NM_001313590.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF313122 | |||||||
| TrEMBL | UniProtAcc | H2KZ27 | |||||||
| A0A0K3ATW7 | |||||||||
| Q7YZG1 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ27 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Mar 2020 18:05:36 | WBPerson1983 | Name_change | CGC_name | mfsd-13.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mfsd | ||||||||
| Allele | WBVar01477620 | ||||||||
| WBVar01499702 | |||||||||
| WBVar01438382 | |||||||||
| WBVar01438384 | |||||||||
| WBVar01438385 | |||||||||
| WBVar01438386 | |||||||||
| WBVar02130203 | |||||||||
| WBVar01934898 | |||||||||
| WBVar02018023 | |||||||||
| WBVar01307508 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01655354 | |||||||||
| WBVar01655355 | |||||||||
| WBVar01559604 | |||||||||
| WBVar00369646 | |||||||||
| WBVar01546692 | |||||||||
| WBVar00369647 | |||||||||
| WBVar00369648 | |||||||||
| WBVar00369649 | |||||||||
| WBVar00369650 | |||||||||
| WBVar00369651 | |||||||||
| WBVar00742458 | |||||||||
| WBVar00742459 | |||||||||
| WBVar00742460 | |||||||||
| WBVar00742461 | |||||||||
| WBVar00742462 | |||||||||
| WBVar00742463 | |||||||||
| WBVar00742464 | |||||||||
| WBVar01604131 | |||||||||
| WBVar00742465 | |||||||||
| WBVar00742466 | |||||||||
| WBVar00742467 | |||||||||
| WBVar01474193 | |||||||||
| WBVar00742468 | |||||||||
| WBVar00742469 | |||||||||
| WBVar00742470 | |||||||||
| WBVar00742471 | |||||||||
| WBVar02151530 | |||||||||
| WBVar02148336 | |||||||||
| WBVar00173121 | |||||||||
| WBVar02148357 | |||||||||
| WBVar00173122 | |||||||||
| WBVar00173123 | |||||||||
| WBVar00173124 | |||||||||
| WBVar02069262 | |||||||||
| WBVar01538262 | |||||||||
| WBVar01538263 | |||||||||
| WBVar00225546 | |||||||||
| WBVar01960085 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001182 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00017886 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human MFSD13A (major facilitator superfamily domain containing 13A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27H5.4a | |||||||
| C27H5.4b | |||||||||
| C27H5.4c | |||||||||
| Corresponding_CDS_history | C27H5.4a:wp247 | ||||||||
| C27H5.4b:wp247 | |||||||||
| Corresponding_transcript | C27H5.4a.1 | ||||||||
| C27H5.4b.1 | |||||||||
| C27H5.4c.1 | |||||||||
| Other_sequence | Hbac_isotig07375 | ||||||||
| BU585584.1 | |||||||||
| CRC09987_1 | |||||||||
| CR08260 | |||||||||
| Associated_feature | WBsf650211 | ||||||||
| WBsf988370 | |||||||||
| WBsf1012493 | |||||||||
| WBsf223302 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011276 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027191 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070158 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013061 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024657 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029284 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041375 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023564 | ||||||||
| Expr1145409 | |||||||||
| Expr2001186 | |||||||||
| Expr2019408 | |||||||||
| Drives_construct | WBCnstr00028272 | ||||||||
| Construct_product | WBCnstr00028272 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (194) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Map | II | Position | 0.496398 | |||||
| Positive | Positive_clone | C27H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
