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WormBase Tree Display for Gene: WBGene00016052

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Name Class

WBGene00016052EvidencePaper_evidenceWBPaper00005976
SMapS_parentSequenceC24B9
IdentityVersion2
NameCGC_namedod-3Person_evidenceWBPerson1157
Sequence_nameC24B9.9
Molecular_nameC24B9.9
C24B9.9.1
CE17451
Other_nameCELE_C24B9.9Accession_evidenceNDBBX284605
Public_namedod-3
DB_infoDatabaseAceViewgene5D208
WormQTLgeneWBGene00016052
WormFluxgeneWBGene00016052
NDBlocus_tagCELE_C24B9.9
PanthergeneCAEEL|WormBase=WBGene00016052|UniProtKB=O76438
familyPTHR16206
NCBIgene178737
RefSeqproteinNM_071341.7
TREEFAMTREEFAM_IDTF317716
TrEMBLUniProtAccO76438
UniProt_GCRPUniProtAccO76438
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
225 Aug 2004 11:02:01WBPerson1971Name_changeCGC_namedod-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdod
Allele (21)
StrainWBStrain00033032
RNASeq_FPKM (74)
GO_annotation00038396
Ortholog (19)
ParalogWBGene00002368Caenorhabditis elegansFrom_analysisPanther
WBGene00011427Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015342Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00077693Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
TreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016971Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC24B9.9
Corresponding_transcriptC24B9.9.1
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00041083Inferred_automaticallyRNAi_primary
WBRNAi00011102Inferred_automaticallyRNAi_primary
WBRNAi00095232Inferred_automaticallyRNAi_primary
WBRNAi00029140Inferred_automaticallyRNAi_primary
WBRNAi00063160Inferred_automaticallyRNAi_primary
Expr_patternExpr1014483
Expr1145119
Expr2011021
Expr2029258
Drives_constructWBCnstr00028361
Construct_productWBCnstr00028361
Microarray_results (18)
Expression_cluster (409)
InteractionWBInteraction000222625
WBInteraction000262363
WBInteraction000277864
WBInteraction000282489
WBInteraction000286737
WBInteraction000289115
WBInteraction000297179
WBInteraction000299948
WBInteraction000309016
WBInteraction000317401
WBInteraction000318527
WBInteraction000322609
WBInteraction000340684
WBInteraction000343796
WBInteraction000350400
WBInteraction000358640
WBInteraction000363093
WBInteraction000363524
WBInteraction000372085
WBInteraction000373890
WBInteraction000375686
WBInteraction000376381
WBInteraction000394649
WBInteraction000395139
WBInteraction000395632
WBInteraction000400935
WBInteraction000406422
WBInteraction000407651
WBInteraction000413594
WBInteraction000418619
WBInteraction000420711
WBInteraction000449738
WBInteraction000452297
WBInteraction000453640
WBInteraction000455827
WBInteraction000459029
WBInteraction000461340
WBInteraction000502699
WBInteraction000504433
WBInteraction000504434
WBInteraction000505111
WBInteraction000519490
WBInteraction000519491
WBInteraction000519492
WBInteraction000519950
WBInteraction000520448
WBInteraction000520502
WBInteraction000541241
Map_infoMapVPosition-13.233Error0.002529
PositivePositive_cloneC24B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene