WormBase Tree Display for Gene: WBGene00016029

WBGene00016029 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: elf-1 Person_evidence: WBPerson260
      Sequence_name: C24A1.2
      Molecular_name: C24A1.2a
        C24A1.2a.1
        CE27722
        C24A1.2b
        CE38587
        C24A1.2b.1
      Other_name: W02B3.g Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_C24A1.2 Accession_evidence: NDB BX284603
      Public_name: elf-1
    DB_info: Database: WormQTL gene WBGene00016029
        WormFlux gene WBGene00016029
        NDB locus_tag CELE_C24A1.2
        Panther gene CAEEL|WormBase=WBGene00016029|UniProtKB=H2KYY1
          family PTHR11849
        NCBI gene 175226
        RefSeq protein NM_001026010.5
            NM_001026009.3
        TrEMBL UniProtAcc Q400M2
            H2KYY1
        UniProt_GCRP UniProtAcc H2KYY1
        OMIM gene 300775
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 08 Nov 2011 16:15:59 WBPerson2970 Name_change: CGC_name: elf-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: elf
    Allele (678)
    Strain: WBStrain00029508
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (41)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in gonad development and regulation of cell division. Predicted to be located in nucleus. Expressed in head neurons and pharynx. Is an ortholog of human ELF1 (E74 like ETS transcription factor 1); ELF2 (E74 like ETS transcription factor 2); and ELF4 (E74 like ETS transcription factor 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: EFO:MONDO:0031384 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3319)
  Molecular_info: Corresponding_CDS: C24A1.2a
      C24A1.2b
    Corresponding_CDS_history: C24A1.2:wp143
    Corresponding_transcript: C24A1.2a.1
      C24A1.2b.1
    Other_sequence (13)
    Associated_feature (29)
    Transcription_factor: WBTranscriptionFactor000693
  Experimental_info: RNAi_result: WBRNAi00041041 Inferred_automatically: RNAi_primary
      WBRNAi00006657 Inferred_automatically: RNAi_primary
      WBRNAi00029125 Inferred_automatically: RNAi_primary
      WBRNAi00107182 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7441
      Expr1019693
      Expr1036851
      Expr1145081
      Expr2011273
      Expr2029509
    Drives_construct: WBCnstr00012585
    Microarray_results (30)
    Expression_cluster (164)
    Interaction (31)
  Map_info: Map: III Position: -26.2701
    Positive: Positive_clone: C24A1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00032994
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene