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WormBase Tree Display for Gene: WBGene00016004

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Name Class

WBGene00016004SMapS_parentSequenceC18H9
IdentityVersion1
NameSequence_nameC18H9.6
Molecular_nameC18H9.6
C18H9.6.1
CE44820
Other_nameCELE_C18H9.6Accession_evidenceNDBBX284602
Public_nameC18H9.6
DB_infoDatabase (9)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (21)
StrainWBStrain00007587
RNASeq_FPKM (74)
OrthologWBGene00032382Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00054107Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00084754Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00137786Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP28.g12623Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g12624Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g12625Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23447Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g23448Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g12443Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g12444Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g20357Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20358Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22285Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22286Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_04240.g18704Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12060Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00043.g2298Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04571Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006282Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_006318Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g4833Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00019273Caenorhabditis elegansFrom_analysisPanther
WBGene00020577Caenorhabditis elegansFrom_analysisPanther
WBGene00020576Caenorhabditis elegansFrom_analysisPanther
WBGene00020578Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in AVE; head mesodermal cell; intestine; mechanosensory neurons; and pharynx based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; RNA-seq; and proteomic studies. Is affected by thirty-nine chemicals including 1-methylnicotinamide; Mercuric Chloride; and rotenone based on RNA-seq; microarray; and proteomic studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC18H9.6
Corresponding_CDS_historyC18H9.6:wp151
Corresponding_transcriptC18H9.6.1
Other_sequenceCSC02068_1
FD515537.1
CBC12126_1
Associated_featureWBsf650167
Experimental_infoRNAi_resultWBRNAi00040995Inferred_automaticallyRNAi_primary
WBRNAi00029103Inferred_automaticallyRNAi_primary
WBRNAi00011042Inferred_automaticallyRNAi_primary
Expr_patternExpr1015402
Expr1145042
Expr2001003
Expr2019221
Microarray_results (13)
Expression_cluster (266)
InteractionWBInteraction000274119
WBInteraction000300536
WBInteraction000396174
WBInteraction000399809
WBInteraction000433949
Map_infoPositivePositive_cloneC18H9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-0.0289689
ReferenceWBPaper00063976
WBPaper00065331
MethodGene