WormBase Tree Display for Gene: WBGene00020577
expand all nodes | collapse all nodes | view schema
| WBGene00020577 | SMap | S_parent | Sequence | T19D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T19D12.2 | |||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_T19D12.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T19D12.2 | ||||||||
| DB_info | Database | AceView | gene | 2G955 | |||||
| 2G963 | |||||||||
| WormQTL | gene | WBGene00020577 | |||||||
| WormFlux | gene | WBGene00020577 | |||||||
| NDB | locus_tag | CELE_T19D12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020577|UniProtKB=H2L077 | |||||||
| family | PTHR37972 | ||||||||
| NCBI | gene | 174099 | |||||||
| RefSeq | protein | NM_062955.6 | |||||||
| NM_182239.7 | |||||||||
| NM_001373733.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF317794 | |||||||
| TrEMBL | UniProtAcc | H2L077 | |||||||
| H2L078 | |||||||||
| Q86ND3 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L077 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00016004 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00019273 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020576 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020578 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in amphid sensillum; head mesodermal cell; intestine; and mechanosensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including rotenone; levamisole; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: von Willebrand factor A-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19D12.2a | |||||||
| T19D12.2b | |||||||||
| T19D12.2c | |||||||||
| Corresponding_CDS_history | T19D12.2:wp94 | ||||||||
| T19D12.2d:wp142 | |||||||||
| Corresponding_transcript | T19D12.2a.1 | ||||||||
| T19D12.2a.2 | |||||||||
| T19D12.2b.1 | |||||||||
| T19D12.2c.1 | |||||||||
| T19D12.2c.2 | |||||||||
| Associated_feature | WBsf644312 | ||||||||
| WBsf221477 | |||||||||
| WBsf221478 | |||||||||
| WBsf221479 | |||||||||
| WBsf221480 | |||||||||
| WBsf221481 | |||||||||
| WBsf221482 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053530 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053528 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000422 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009184 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1038967 | ||||||||
| Expr1157098 | |||||||||
| Expr2006258 | |||||||||
| Expr2024476 | |||||||||
| Drives_construct | WBCnstr00025037 | ||||||||
| Construct_product | WBCnstr00025037 | ||||||||
| Microarray_results (36) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction | WBInteraction000195639 | ||||||||
| WBInteraction000201305 | |||||||||
| WBInteraction000240278 | |||||||||
| WBInteraction000298739 | |||||||||
| WBInteraction000323356 | |||||||||
| WBInteraction000334881 | |||||||||
| WBInteraction000347903 | |||||||||
| WBInteraction000416490 | |||||||||
| Map_info | Positive | Positive_clone | T19D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.0468616 | |||||||
| Reference | WBPaper00043670 | ||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
