WormBase Tree Display for Gene: WBGene00015552
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| WBGene00015552 | SMap | S_parent | Sequence | C06G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gldi-4 | Person_evidence | WBPerson6609 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | C06G3.6 | ||||||||
| Molecular_name (4) | |||||||||
| Other_name | CELE_C06G3.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gldi-4 | ||||||||
| DB_info | Database | AceView | gene | 4H783 | |||||
| WormQTL | gene | WBGene00015552 | |||||||
| WormFlux | gene | WBGene00015552 | |||||||
| NDB | locus_tag | CELE_C06G3.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015552|UniProtKB=Q17746 | |||||||
| family | PTHR15090 | ||||||||
| NCBI | gene | 177467 | |||||||
| RefSeq | protein | NM_068685.8 | |||||||
| TrEMBL | UniProtAcc | Q17746 | |||||||
| UniProt_GCRP | UniProtAcc | Q17746 | |||||||
| OMIM | gene | 601530 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | gldi-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gldi | ||||||||
| Allele | WBVar00427924 | ||||||||
| WBVar00427925 | |||||||||
| WBVar00427926 | |||||||||
| WBVar00427927 | |||||||||
| WBVar00427928 | |||||||||
| WBVar00427929 | |||||||||
| WBVar00427930 | |||||||||
| WBVar00190381 | |||||||||
| WBVar00919038 | |||||||||
| WBVar00919039 | |||||||||
| WBVar00919040 | |||||||||
| WBVar00919041 | |||||||||
| WBVar00919042 | |||||||||
| WBVar00919043 | |||||||||
| WBVar00919044 | |||||||||
| WBVar00919045 | |||||||||
| WBVar00919046 | |||||||||
| WBVar01499395 | |||||||||
| WBVar00919047 | |||||||||
| WBVar01499396 | |||||||||
| WBVar00919048 | |||||||||
| WBVar00919049 | |||||||||
| WBVar00919050 | |||||||||
| WBVar01823660 | |||||||||
| WBVar01491899 | |||||||||
| WBVar01794763 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00249466 | |||||||||
| WBVar01668783 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00011737 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012067 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012516 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021495 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable K63-linked polyubiquitin modification-dependent protein binding activity and protein kinase C binding activity. Predicted to be involved in aggrephagy; endosome organization; and mitophagy. Predicted to be located in aggresome and amphisome. Human ortholog(s) of this gene implicated in Paget's disease of bone 3; distal myopathy with rimmed vacuoles; and neurodegenerative disease (multiple). Is an ortholog of human SQSTM1 (sequestosome 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081366 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11280) | ||||
| DOID:0110068 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11280) | ||||||
| DOID:0081363 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11280) | ||||||
| DOID:5408 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11280) | ||||||
| DOID:0081364 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11280) | ||||||
| Molecular_info | Corresponding_CDS | C06G3.6 | |||||||
| Corresponding_transcript | C06G3.6.1 | ||||||||
| C06G3.6.2 | |||||||||
| Other_sequence | PPC14695_1 | ||||||||
| CRC07054_1 | |||||||||
| CR03421 | |||||||||
| Associated_feature | WBsf646058 | ||||||||
| WBsf659792 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000578 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028595 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091188 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010342 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091189 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090962 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039938 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023085 | ||||||||
| Expr1036660 | |||||||||
| Expr1144012 | |||||||||
| Expr2000544 | |||||||||
| Expr2018770 | |||||||||
| Drives_construct | WBCnstr00028757 | ||||||||
| Construct_product | WBCnstr00028757 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | IV | Position | 3.27714 | |||||
| Positive | Positive_clone | C06G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
