WormBase Tree Display for Gene: WBGene00015518

WBGene00015518 SMap: S_parent: Sequence: C06E1
  Identity: Version: 1
    Name: Sequence_name: C06E1.1
      Molecular_name: C06E1.1
        C06E1.1.1
        CE00054
      Other_name: CELE_C06E1.1 Accession_evidence: NDB BX284603
      Public_name: C06E1.1
    DB_info: Database: AceView gene 3J695
        WormQTL gene WBGene00015518
        WormFlux gene WBGene00015518
        NDB locus_tag CELE_C06E1.1
        Panther gene CAEEL|WormBase=WBGene00015518|UniProtKB=P34296
          family PTHR12300
        NCBI gene 176205
        RefSeq protein NM_066492.4
        SwissProt UniProtAcc P34296
        TREEFAM TREEFAM_ID TF354301
        UniProt_GCRP UniProtAcc P34296
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00041415
      00041416
    Ortholog: WBGene00035631 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064435 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00144770 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00211976 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00227304 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g3210 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13742 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3585 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20918 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17644 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g2213 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13169 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C06E1.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18531 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02236.g25564 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19349 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008184 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g23033 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30038300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8429 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00098833 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278518 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00285880 Trichuris muris From_analysis: WormBase-Compara
      WBGene00290139 Trichuris muris From_analysis: WormBase-Compara
      WBGene00292801 Trichuris muris From_analysis: WormBase-Compara
      WBGene00294067 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296462 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00011401 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012180 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020562 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022127 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018930 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022452 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABalapppaa; ABalpapppa; ABalppappa; ciliated neurons; and male distal tip cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including rotenone; bisphenol S; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: TB2/DP1/HVA22-related protein and TB2/DP1, HVA22 family. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C06E1.1
    Corresponding_transcript: C06E1.1.1
    Other_sequence: CJC12185_1
      CR08735
      CRC04480_1
      CR00759
    Associated_feature: WBsf654981
      WBsf654982
      WBsf717951
      WBsf993411
      WBsf993412
      WBsf1015461
      WBsf225443
      WBsf225444
      WBsf225445
  Experimental_info: RNAi_result: WBRNAi00010300 Inferred_automatically: RNAi_primary
      WBRNAi00005478 Inferred_automatically: RNAi_primary
      WBRNAi00005690 Inferred_automatically: RNAi_primary
      WBRNAi00028571 Inferred_automatically: RNAi_primary
      WBRNAi00039881 Inferred_automatically: RNAi_primary
      WBRNAi00039898 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028072
      Expr1036643
      Expr1143966
      Expr2000524
      Expr2018750
    Drives_construct: WBCnstr00028785
    Construct_product: WBCnstr00028785
    Microarray_results (21)
    Expression_cluster (201)
    Interaction (187)
  Map_info: Positive: Positive_clone: C06E1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -0.225193
  Reference: WBPaper00041771
  Method: Gene