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WormBase Tree Display for Gene: WBGene00015480

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Name Class

WBGene00015480SMapS_parentSequenceC05D10
IdentityVersion1
NameSequence_nameC05D10.4
Molecular_nameC05D10.4a
C05D10.4a.1
CE30423
C05D10.4b
CE54101
C05D10.4c
CE30425
C05D10.4b.1
C05D10.4c.1
Other_nameCELE_C05D10.4Accession_evidenceNDBBX284603
Public_nameC05D10.4
DB_infoDatabaseAceViewgene3H178
WormQTLgeneWBGene00015480
WormFluxgeneWBGene00015480
NDBlocus_tagCELE_C05D10.4
NCBIgene175860
RefSeqproteinNM_001379743.1
NM_171149.5
NM_065922.6
SwissProtUniProtAccQ11181
UniProt_GCRPUniProtAccQ11181
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (155)
RNASeq_FPKM (74)
GO_annotation00057372
00057373
Ortholog (18)
ParalogWBGene00003516Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABaraappaa; MSaaaaapa; excretory cell; neurons; and pharyngeal gland cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including aldicarb; stavudine; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; Phosphorylation site; and SAM domain (Sterile alpha motif).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05D10.4a
C05D10.4b
C05D10.4c
Corresponding_CDS_historyC05D10.4b:wp275
Corresponding_transcriptC05D10.4a.1
C05D10.4b.1
C05D10.4c.1
Other_sequence (30)
Associated_feature (34)
Experimental_infoRNAi_resultWBRNAi00039723Inferred_automaticallyRNAi_primary
WBRNAi00005303Inferred_automaticallyRNAi_primary
WBRNAi00028490Inferred_automaticallyRNAi_primary
Expr_patternExpr1022085
Expr1036620
Expr1143820
Expr2000459
Expr2018682
Drives_constructWBCnstr00028813
Construct_productWBCnstr00028813
Microarray_results (33)
Expression_clusterWBPaper00031040:Cluster_5
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:excretory-cell_larva_enriched
WBPaper00037950:excretory-cell_larva_SelectivelyEnriched
WBPaper00037950:GABAergic-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038061:aldicarb_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045521:Gender_Neutral
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046121:ecdoderm_unique
WBPaper00046858:elt-2(RNAi)_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:vulva-uterus_expressed
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057154:HeatShock_downregulated_miRNA-target
WBPaper00057154:HeatShock_upregulated_mRNA
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:DD
WBPaper00061340:g1A_g1P
WBPaper00061340:g1A_parent
WBPaper00061340:g2
WBPaper00061340:g2_parent
WBPaper00061340:I2_grandparent
WBPaper00061340:MC
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061340:Parent_of_MI_pm1DR
WBPaper00061340:Pharyngeal_neuron
WBPaper00061340:Posterior_arcade_cell
WBPaper00061340:SIA
WBPaper00061340:SMB
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:176662_at-Y53F4B.16
WBPaper00061527:sol-1-jnk-1_18695
WBPaper00061527:Y37D8A.16-F54D1.6_15313
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065841:21_0
WBPaper00065841:58_1
WBPaper00065841:59_0
WBPaper00065841:70_0
WBPaper00065841:109_0
WBPaper00065841:118_0
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_6
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00029437:rde-4_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031832:slr-2_regulated
WBPaper00034739:N2lessDR1350
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00038304:octr-1_regulated
WBPaper00040184:hcf-1up_sir-2.1down_daf-2nc
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042067:Cu2+_upregulated_WT
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045865:biofilm_downregulated_B
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00056330:mrps-5(RNAi)_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000394983
WBInteraction000523687
WBInteraction000545878
WBInteraction000545916
WBInteraction000546012
WBInteraction000546087
WBInteraction000546402
WBInteraction000546475
WBInteraction000546828
WBInteraction000547101
Map_infoPositivePositive_cloneC05D10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.42033
MethodGene