WormBase Tree Display for Gene: WBGene00015476
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WBGene00015476 | SMap | S_parent | Sequence | C05D9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C05D9.9 | |||||||
Molecular_name | C05D9.9a | ||||||||
C05D9.9a.1 | |||||||||
CE27653 | |||||||||
C05D9.9b | |||||||||
CE39317 | |||||||||
C05D9.9b.1 | |||||||||
Other_name | CELE_C05D9.9 | Accession_evidence | NDB | BX284606 | |||||
Public_name | C05D9.9 | ||||||||
DB_info | Database | AceView | gene | XB742 | |||||
WormQTL | gene | WBGene00015476 | |||||||
WormFlux | gene | WBGene00015476 | |||||||
NDB | locus_tag | CELE_C05D9.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015476|UniProtKB=H2KYG6 | |||||||
family | PTHR35182 | ||||||||
NCBI | gene | 180466 | |||||||
RefSeq | protein | NM_001047751.3 | |||||||
NM_001047750.5 | |||||||||
TrEMBL | UniProtAcc | H2KYG6 | |||||||
Q95ZM9 | |||||||||
UniProt_GCRP | UniProtAcc | H2KYG6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00010216 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00015281 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00022230 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00044516 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00020871 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017128 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017127 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including B cell; MSaapaapa; MSpapaapa; dopaminergic neurons; and mechanosensory neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-two chemicals including rotenone; Tunicamycin; and Cadmium Chloride based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: Immunoglobulin-like fold and Immunoglobulin-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C05D9.9a | |||||||
C05D9.9b | |||||||||
Corresponding_CDS_history | C05D9.9:wp151 | ||||||||
Corresponding_transcript (2) | |||||||||
Other_sequence (4) | |||||||||
Associated_feature | WBsf670105 | ||||||||
WBsf1003951 | |||||||||
WBsf1003952 | |||||||||
WBsf1022219 | |||||||||
WBsf237005 | |||||||||
Experimental_info | RNAi_result | WBRNAi00039767 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001327 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021115 | ||||||||
Expr1143853 | |||||||||
Expr2000476 | |||||||||
Expr2018699 | |||||||||
Drives_construct | WBCnstr00028817 | ||||||||
Construct_product | WBCnstr00028817 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (195) | |||||||||
Map_info | Positive | Positive_clone | C05D9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -18.521 | |||||||
Method | Gene |