WormBase Tree Display for Gene: WBGene00020871
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| WBGene00020871 | SMap | S_parent | Sequence | T28A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T28A11.4 | |||||||
| Molecular_name | T28A11.4 | ||||||||
| T28A11.4.1 | |||||||||
| CE14287 | |||||||||
| Other_name | CELE_T28A11.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T28A11.4 | ||||||||
| DB_info | Database | AceView | gene | 5D747 | |||||
| WormQTL | gene | WBGene00020871 | |||||||
| WormFlux | gene | WBGene00020871 | |||||||
| NDB | locus_tag | CELE_T28A11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020871|UniProtKB=P91520 | |||||||
| family | PTHR35182 | ||||||||
| NCBI | gene | 189011 | |||||||
| RefSeq | protein | NM_071502.3 | |||||||
| TREEFAM | TREEFAM_ID | TF320479 | |||||||
| TrEMBL | UniProtAcc | P91520 | |||||||
| UniProt_GCRP | UniProtAcc | P91520 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00007497 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00010216 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00015281 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015476 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017127 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017128 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022230 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044516 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in dopaminergic neurons; muscle cell; and ventral nerve cord based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including copper sulfate; multi-walled carbon nanotube; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28A11.4 | |||||||
| Corresponding_transcript | T28A11.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019367 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054365 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025871 | ||||||||
| Expr1157912 | |||||||||
| Drives_construct | WBCnstr00024822 | ||||||||
| Construct_product | WBCnstr00024822 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction | WBInteraction000213068 | ||||||||
| WBInteraction000267016 | |||||||||
| Map_info | Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.398 | |||||||
| Reference | WBPaper00064623 | ||||||||
| Method | Gene |
