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WormBase Tree Display for Gene: WBGene00015476

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Name Class

WBGene00015476SMapS_parentSequenceC05D9
IdentityVersion1
NameSequence_nameC05D9.9
Molecular_nameC05D9.9a
C05D9.9a.1
CE27653
C05D9.9b
CE39317
C05D9.9b.1
Other_nameCELE_C05D9.9Accession_evidenceNDBBX284606
Public_nameC05D9.9
DB_infoDatabaseAceViewgeneXB742
WormQTLgeneWBGene00015476
WormFluxgeneWBGene00015476
NDBlocus_tagCELE_C05D9.9
PanthergeneCAEEL|WormBase=WBGene00015476|UniProtKB=H2KYG6
familyPTHR35182
NCBIgene180466
RefSeqproteinNM_001047751.3
NM_001047750.5
TrEMBLUniProtAccH2KYG6
Q95ZM9
UniProt_GCRPUniProtAccH2KYG6
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKM (74)
Ortholog (22)
ParalogWBGene00010216Caenorhabditis elegansFrom_analysisPanther
WBGene00015281Caenorhabditis elegansFrom_analysisPanther
WBGene00022230Caenorhabditis elegansFrom_analysisPanther
WBGene00044516Caenorhabditis elegansFrom_analysisPanther
WBGene00020871Caenorhabditis elegansFrom_analysisPanther
WBGene00017128Caenorhabditis elegansFrom_analysisPanther
WBGene00017127Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in several structures, including B cell; MSaapaapa; MSpapaapa; dopaminergic neurons; and mechanosensory neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-two chemicals including rotenone; Tunicamycin; and Cadmium Chloride based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: Immunoglobulin-like fold and Immunoglobulin-like domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05D9.9a
C05D9.9b
Corresponding_CDS_historyC05D9.9:wp151
Corresponding_transcriptC05D9.9a.1
C05D9.9b.1
Other_sequenceCSC00447_1
FD515774.1
CBC09158_1
FD517044.1
Associated_featureWBsf670105
WBsf1003951
WBsf1003952
WBsf1022219
WBsf237005
Experimental_infoRNAi_resultWBRNAi00039767Inferred_automaticallyRNAi_primary
WBRNAi00001327Inferred_automaticallyRNAi_primary
Expr_patternExpr1021115
Expr1143853
Expr2000476
Expr2018699
Drives_constructWBCnstr00028817
Construct_productWBCnstr00028817
Microarray_results (22)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00037950:PVD-OLL-neurons_larva_SelectivelyEnriched
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00041071:spe-44_upregulated
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045314:S.aureus-induced_N2
WBPaper00045390:tunicamycin_downregulated
WBPaper00045401:N.parisii_64h_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046024:sleep_downregulated_oscillating
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046795:starvation_upregulated
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049217:TCER-1_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049732:blmp-1(tm548);daf-7(e1372ts)_vs_daf-7(e1372ts)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051558:fog-2(q71)_regulated
WBPaper00052856:Cadmium_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053092:procyanidins_downregulated
WBPaper00053140:DecreasingResponse_20nmAgCit
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056218:daf-16(mu86)_upregulated_Day5
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059191:hsp-16.2p-LIN-29_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060526:plp-1(ok2155)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061340:B
WBPaper00061340:g1A_parent
WBPaper00061340:M_cell
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:F16C3.2-far-7
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061653:alh-4(hj221)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065272:dhgd-1(tm6671)_upregulated
WBPaper00065392:Lb.rhamnosus_upregulated
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065841:0_0
WBPaper00065841:30_2
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00027342:alpha-Synuclein(A53T)_upregulated
WBPaper00027342:alpha-Synuclein(WT)_upregulated
WBPaper00028789:PA14_vs_OP50_upregulated_4hr
WBPaper00031252:AIN-1_IP_enriched
WBPaper00032948:StarveUp1
WBPaper00034661:AgNPs_upregulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_C
WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
WBPaper00038172:aak-2overexpression_down_regulated
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.5
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041207:CE_dauer_up
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00045865:biofilm_upregulated_A
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00050538:Fasting_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
Map_infoPositivePositive_cloneC05D9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-18.521
MethodGene