WormBase Tree Display for Gene: WBGene00015426

WBGene00015426 SMap: S_parent: Sequence: C04E6
  Identity: Version: 3
    Name: Sequence_name: C04E6.12
      Molecular_name (12)
      Other_name: CELE_C04E6.12 Accession_evidence: NDB BX284605
      Public_name: C04E6.12
    DB_info: Database: AceView gene 5G400
        WormQTL gene WBGene00015426
        NDB locus_tag CELE_C04E6.12
        NCBI gene 182204
        RefSeq protein NM_001348577.2
            NM_001348575.2
            NM_001348578.1
            NM_001348576.2
        TrEMBL UniProtAcc A0A1N7SYS1
            A0A1N7SYR9
            A0A1N7SYS4
            A0A1N7SYU3
        UniProt_GCRP UniProtAcc A0A1N7SYR9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Jan 2017 12:36:52 WBPerson4025 Event: Changed_class: Pseudogene CDS
        3 12 Jan 2017 12:44:12 WBPerson4025 Event: Changed_class: Pseudogene CDS
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation: 00002605
      00002606
      00002607
      00002608
    Ortholog (22)
    Structured_description: Automated_description: Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be located in extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C04E6.12a
      C04E6.12b
      C04E6.12c
      C04E6.12d
    Corresponding_CDS_history: C04E6.12:wp172
    Corresponding_transcript: C04E6.12a.1
      C04E6.12b.1
      C04E6.12c.1
      C04E6.12d.1
    Corresponding_pseudogene_history: C04E6.12:wp257
    Other_sequence: CBC02880_1
    Associated_feature: WBsf652664
      WBsf652665
      WBsf668655
  Experimental_info: RNAi_result: WBRNAi00039605 Inferred_automatically: RNAi_primary
      WBRNAi00010118 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2000400
      Expr2018624
    Microarray_results (13)
    Expression_cluster: WBPaper00024505:pharyngeal_enriched
      WBPaper00032031:DConiospora_downregulated_OligoArray_24h
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00045774:clk-1_downregulated
      WBPaper00049377:MWCNT_upregulated
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053402:cco-1(RNAi)_downregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055013:hmg-4(RNAi)_downregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L3
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_L2
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056290:mdt-15(mg584)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:mc3
      WBPaper00061340:pm6
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:C54G4.4-Y45F3A.8
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00061590:CGP37157_upregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_upregulated_N2
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065086:JU1400_N.ironsii_regulated
      WBPaper00065086:JU1400_N.parisii_regulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:11_2
      WBPaper00065841:25_1
      WBPaper00065841:40_0
      WBPaper00065841:46_0
      WBPaper00065841:144_0
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_23
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00036286:Pattern_G
      WBPaper00038172:crh-1null_down_regulated
      WBPaper00038172:tax-6null_down_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00047070:xpa-1_UV_downregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc6390]:Cluster_B
  Map_info: Positive: Positive_clone: C04E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -0.772796
  Method: Gene