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WormBase Tree Display for Gene: WBGene00015211

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Name Class

WBGene00015211SMapS_parentSequenceB0496
IdentityVersion1
NameSequence_nameB0496.2
Molecular_nameB0496.2
B0496.2.1
CE52937
Other_nameCELE_B0496.2Accession_evidenceNDBBX284604
Public_nameB0496.2
DB_infoDatabaseAceViewgene4I215
WormQTLgeneWBGene00015211
WormFluxgeneWBGene00015211
NDBlocus_tagCELE_B0496.2
PanthergeneCAEEL|WormBase=WBGene00015211|UniProtKB=Q17524
familyPTHR47022
NCBIgene182006
RefSeqproteinNM_068788.3
TREEFAMTREEFAM_IDTF316540
TrEMBLUniProtAccQ17524
UniProt_GCRPUniProtAccQ17524
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (26)
RNASeq_FPKM (74)
Ortholog (13)
ParalogWBGene00015210Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00020042Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in AFD; germ line; intestine; and in male based on RNA-seq and microarray studies. Is affected by several genes including sir-2.1; pmk-1; and nhr-49 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including methylmercuric chloride; Tunicamycin; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0496.2
Corresponding_CDS_historyB0496.2:wp268
Corresponding_transcriptB0496.2.1
Experimental_infoRNAi_resultWBRNAi00039118Inferred_automaticallyRNAi_primary
WBRNAi00009815Inferred_automaticallyRNAi_primary
Expr_patternExpr1143276
Expr2000214
Expr2018434
Drives_constructWBCnstr00029000
Construct_productWBCnstr00029000
Microarray_results (14)
Expression_clusterWBPaper00032528:L3_depleted
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045390:tunicamycin_upregulated
WBPaper00045521:Spermatogenic
WBPaper00050231:male_enriched
WBPaper00050344:AFD-neuron_enriched
WBPaper00053599:female_vs_male_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:flcn-1(ok975)_downregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060661:hypoxia_upregulated
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:F14F7.4_16243-ZK353.3
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day1_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065158:AFD_enriched
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_9
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00036286:Pattern_E
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040963:TA300_up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc6390]:Cluster_D
[cgc6390]:mixed_spermatogenesis-somatic
InteractionWBInteraction000181946
WBInteraction000229524
WBInteraction000244829
WBInteraction000249852
WBInteraction000289829
Map_infoPositivePositive_cloneB0496Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.337
MethodGene