WormBase Tree Display for Gene: WBGene00020042
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| WBGene00020042 | SMap | S_parent | Sequence | R13A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R13A1.3 | |||||||
| Molecular_name | R13A1.3 | ||||||||
| R13A1.3.1 | |||||||||
| CE48425 | |||||||||
| R13A1.3.2 | |||||||||
| Other_name | CELE_R13A1.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | R13A1.3 | ||||||||
| DB_info | Database | AceView | gene | 4H973 | |||||
| WormQTL | gene | WBGene00020042 | |||||||
| WormFlux | gene | WBGene00020042 | |||||||
| NDB | locus_tag | CELE_R13A1.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020042|UniProtKB=Q21975 | |||||||
| family | PTHR22743 | ||||||||
| NCBI | gene | 187850 | |||||||
| RefSeq | protein | NM_068738.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316540 | |||||||
| TrEMBL | UniProtAcc | Q21975 | |||||||
| UniProt_GCRP | UniProtAcc | Q21975 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Paralog | WBGene00015210 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015211 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including rotenone; manganese chloride; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R13A1.3 | |||||||
| Corresponding_CDS_history | R13A1.3:wp122 | ||||||||
| R13A1.3:wp238 | |||||||||
| Corresponding_transcript | R13A1.3.1 | ||||||||
| R13A1.3.2 | |||||||||
| Associated_feature | WBsf660268 | ||||||||
| WBsf660269 | |||||||||
| Experimental_info | Expr_pattern | Expr1016911 | |||||||
| Expr1038711 | |||||||||
| Expr1155535 | |||||||||
| Expr2005626 | |||||||||
| Microarray_results | SMD_R13A1.3 | ||||||||
| Aff_R13A1.3 | |||||||||
| GPL14144_R13A1.3_411-470_0.882_18_A | |||||||||
| GPL19516_CGZ0032102 | |||||||||
| GPL21109_R13A1.3 | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | R13A1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.29479 | |||||||
| Method | Gene |
