WormBase Tree Display for Gene: WBGene00015164
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WBGene00015164 | SMap | S_parent | Sequence | B0361 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ykt-6 | Person_evidence | WBPerson3094 | |||
Sequence_name | B0361.10 | ||||||
Molecular_name | B0361.10 | ||||||
B0361.10.1 | |||||||
CE20451 | |||||||
B0361.10.2 | |||||||
Other_name | Ce-Ykt6p | Paper_evidence | WBPaper00046399 | ||||
CELE_B0361.10 | Accession_evidence | NDB | BX284603 | ||||
Public_name | ykt-6 | ||||||
DB_info | Database | AceView | gene | 3I376C | |||
3I376 | |||||||
WormQTL | gene | WBGene00015164 | |||||
WormFlux | gene | WBGene00015164 | |||||
NDB | locus_tag | CELE_B0361.10 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015164|UniProtKB=Q9TXZ9 | |||||
family | PTHR45806 | ||||||
NCBI | gene | 176031 | |||||
RefSeq | protein | NM_001392142.1 | |||||
TREEFAM | TREEFAM_ID | TF105606 | |||||
TrEMBL | UniProtAcc | Q9TXZ9 | |||||
UniProt_GCRP | UniProtAcc | Q9TXZ9 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ykt | ||||||
Allele (27) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (17) | |||||||
Contained_in_operon | CEOP3426 | ||||||
Ortholog (33) | |||||||
Paralog | WBGene00004897 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00004898 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004899 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007200 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00014084 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00018853 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022077 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00044062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable SNAP receptor activity and protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; vesicle docking involved in exocytosis; and vesicle targeting. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and plasma membrane. Is an ortholog of human YKT6 (YKT6 v-SNARE homolog). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | B0361.10 | |||||
Corresponding_transcript | B0361.10.1 | ||||||
B0361.10.2 | |||||||
Other_sequence (22) | |||||||
Associated_feature | WBsf226951 | ||||||
Experimental_info | RNAi_result (70) | ||||||
Expr_pattern | Expr1024405 | ||||||
Expr1036492 | |||||||
Expr1143141 | |||||||
Expr2018118 | |||||||
Expr2036255 | |||||||
Drives_construct | WBCnstr00008436 | ||||||
WBCnstr00029038 | |||||||
Construct_product | WBCnstr00029038 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (92) | |||||||
Interaction (94) | |||||||
Map_info | Map | III | Position | -0.756616 | Error | 0.000994 | |
Positive | Positive_clone | B0361 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00034768 | ||||||
WBPaper00035228 | |||||||
WBPaper00038491 | |||||||
WBPaper00039068 | |||||||
WBPaper00040996 | |||||||
WBPaper00046399 | |||||||
WBPaper00049531 | |||||||
WBPaper00052095 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |