Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00015110

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00015110SMapS_parentSequenceB0281
IdentityVersion1
NameSequence_nameB0281.3
Molecular_nameB0281.3
B0281.3.1
CE42044
Other_nameCELE_B0281.3Accession_evidenceNDBBX284602
Public_nameB0281.3
DB_infoDatabaseAceViewgene2C595
WormQTLgeneWBGene00015110
WormFluxgeneWBGene00015110
NDBlocus_tagCELE_B0281.3
PanthergeneCAEEL|WormBase=WBGene00015110|UniProtKB=O16614
familyPTHR47156
NCBIgene181897
RefSeqproteinNM_061831.6
TREEFAMTREEFAM_IDTF322526
TrEMBLUniProtAccO16614
UniProt_GCRPUniProtAccO16614
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (119)
RNASeq_FPKM (74)
GO_annotation00028358
00121100
Ortholog (123)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable zinc ion binding activity. Is an ortholog of human TRIM59 (tripartite motif containing 59).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0281.3
Corresponding_CDS_historyB0281.3:wp187
Corresponding_transcriptB0281.3.1
Associated_featureWBsf986924
WBsf986925
WBsf986926
WBsf1011699
WBsf220916
Experimental_infoRNAi_resultWBRNAi00038857Inferred_automaticallyRNAi_primary
WBRNAi00009658Inferred_automaticallyRNAi_primary
WBRNAi00094652Inferred_automaticallyRNAi_primary
WBRNAi00084226Inferred_automaticallyRNAi_primary
WBRNAi00076046Inferred_automaticallyRNAi_primary
Expr_patternExpr1022241
Expr1143050
Expr2000116
Expr2018332
Microarray_results (17)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00037950:PVD-OLL-neurons_larva_SelectivelyEnriched
WBPaper00038104:DATS_downregulated
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045050:csr-1(hypomorph)_upregulated
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049217:TCER-1_downregulated
WBPaper00049334:CE_intestine_enriched
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050412:cco-1(RNAi)_downregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053020:sid-3(ok973)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056167:Cry5B_downregulated
WBPaper00056284:ints-4(RNAi)_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058948:npr-8(ok1439)_upregulated_PA14
WBPaper00058948:PA14_downregulated
WBPaper00059191:hsp-16.2p-LIN-29_downregulated
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059839:S.maltophilia_regulated
WBPaper00059987:Wounding_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061527:W01F3.2_1554-Y106G6D.8
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062590:Aging_upregulated_intestine
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:JU1400_N.parisii_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_4
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00032062:age_regulated_genes
WBPaper00034739:N2moreDR1350
WBPaper00034757:up_by_oxidative_stress
WBPaper00035873:osm-11_regulated
WBPaper00036286:Pattern_D
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040821:Au-NP_regulated
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q50_up
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HF_11d_2.0mM_Down
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00044091:Bpseudomallei_induced_8h
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
[cgc6390]:herm_soma-enriched
Interaction (55)
Map_infoPositivePositive_cloneB0281Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-13.8337
ReferenceWBPaper00027315
WBPaper00038491
WBPaper00055090
MethodGene