WormBase Tree Display for Gene: WBGene00014254
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WBGene00014254 | SMap | S_parent | Sequence | ZK1320 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 21 Sep 2004 09:38:16 | WBPerson1971 | Name_change | CGC_name | cyp-13A10 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cyp | ||||||||
Allele | WBVar01499702 | ||||||||
WBVar01720480 | |||||||||
WBVar01413770 | |||||||||
WBVar01498435 | |||||||||
WBVar00757696 | |||||||||
WBVar00757697 | |||||||||
WBVar00757698 | |||||||||
WBVar00757699 | |||||||||
WBVar00757700 | |||||||||
WBVar00757701 | |||||||||
WBVar00757702 | |||||||||
WBVar00757703 | |||||||||
WBVar00757704 | |||||||||
WBVar00757705 | |||||||||
WBVar00757706 | |||||||||
WBVar00757707 | |||||||||
WBVar00757708 | |||||||||
WBVar00757709 | |||||||||
WBVar00757710 | |||||||||
WBVar01499017 | |||||||||
WBVar01846653 | |||||||||
WBVar01309731 | |||||||||
WBVar01309732 | |||||||||
WBVar01309733 | |||||||||
WBVar01309734 | |||||||||
WBVar01309735 | |||||||||
WBVar01309736 | |||||||||
WBVar00174755 | |||||||||
WBVar01627021 | |||||||||
WBVar01627022 | |||||||||
WBVar01243376 | |||||||||
WBVar01488609 | |||||||||
WBVar01499468 | |||||||||
WBVar01498940 | |||||||||
WBVar00374551 | |||||||||
WBVar00374552 | |||||||||
WBVar00374553 | |||||||||
WBVar00374554 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00055359 | ||||||||
00055360 | |||||||||
00055361 | |||||||||
00055362 | |||||||||
00055363 | |||||||||
00055364 | |||||||||
00120967 | |||||||||
00120968 | |||||||||
00120969 | |||||||||
00120970 | |||||||||
Ortholog (80) | |||||||||
Paralog (12) | |||||||||
Structured_description | Concise_description | cyp-13A10 encodes one of ~80 C. elegans cytochrome P450s: membrane-associated, heme-containing NADPH-dependent monooxygenases that catalyze the oxidative metabolism of a variety of exogenous and endogenous compounds. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 20 Nov 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in several diseases, including Ghosal hematodiaphyseal syndrome; familial Mediterranean fever; and leukemia (multiple). Is an ortholog of several human genes including CYP3A4 (cytochrome P450 family 3 subfamily A member 4); CYP3A5 (cytochrome P450 family 3 subfamily A member 5); and CYP3A7 (cytochrome P450 family 3 subfamily A member 7). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||
DOID:3526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11609) | ||||||
DOID:2987 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2637) | ||||||
DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||||
DOID:0112251 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11609) | ||||||
DOID:0080630 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||||
DOID:10825 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2637) | ||||||
Molecular_info | Corresponding_CDS | ZK1320.4 | |||||||
Corresponding_CDS_history | ZK1320.4:wp78 | ||||||||
ZK1320.4:wp134 | |||||||||
Corresponding_transcript | ZK1320.4.1 | ||||||||
Other_sequence | Tcol_isotig15615 | ||||||||
CJC00249_1 | |||||||||
PPC08967_1 | |||||||||
Associated_feature | WBsf650448 | ||||||||
WBsf650449 | |||||||||
WBsf223686 | |||||||||
Experimental_info | RNAi_result | WBRNAi00092627 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059235 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012131 | ||||||||
Expr1036391 | |||||||||
Expr1162665 | |||||||||
Expr2010678 | |||||||||
Expr2028918 | |||||||||
Drives_construct | WBCnstr00029187 | ||||||||
Construct_product | WBCnstr00029187 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (181) | |||||||||
Interaction (27) | |||||||||
Map_info | Map | II | Position | 1.6365 | Error | 0.002261 | |||
Positive | Positive_clone | ZK1320 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00037579 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00062515 | |||||||||
WBPaper00064598 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |