WormBase Tree Display for Gene: WBGene00014001
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| WBGene00014001 | SMap | S_parent | Sequence | ZK593 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pyk-2 | Person_evidence | WBPerson360 | |||||
| Sequence_name | ZK593.1 | ||||||||
| Molecular_name | ZK593.1a | ||||||||
| ZK593.1a.1 | |||||||||
| CE24731 | |||||||||
| ZK593.1b | |||||||||
| CE06622 | |||||||||
| ZK593.1c | |||||||||
| CE44718 | |||||||||
| ZK593.1b.1 | |||||||||
| ZK593.1c.1 | |||||||||
| Other_name | CELE_ZK593.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pyk-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Jul 2009 12:31:02 | WBPerson9133 | Name_change | CGC_name | pyk-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pyk | ||||||||
| Allele (43) | |||||||||
| Strain | WBStrain00002117 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00009126 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | pyk-2 encodes one of two C. elegans pyruvate kinases; large-scale expression studies show that pyk-2 is expressed in the larval and adult intestine. | Paper_evidence | WBPaper00031006 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 16 Jul 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable pyruvate kinase activity. Predicted to be involved in glycolytic process. Located in endoplasmic reticulum; sarcomere; and striated muscle dense body. Expressed in intestine. Is an ortholog of human PKM (pyruvate kinase M1/2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK593.1a | |||||||
| ZK593.1b | |||||||||
| ZK593.1c | |||||||||
| Corresponding_transcript | ZK593.1a.1 | ||||||||
| ZK593.1b.1 | |||||||||
| ZK593.1c.1 | |||||||||
| Other_sequence (57) | |||||||||
| Associated_feature | WBsf646337 | ||||||||
| WBsf997726 | |||||||||
| WBsf229057 | |||||||||
| WBsf229058 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038344 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00109708 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109755 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085270 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109802 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081180 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109661 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022067 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1225 | ||||||||
| Expr7227 | |||||||||
| Expr9438 | |||||||||
| Expr1010495 | |||||||||
| Expr1036258 | |||||||||
| Expr1162940 | |||||||||
| Expr2015204 | |||||||||
| Expr2033438 | |||||||||
| Drives_construct | WBCnstr00002883 | ||||||||
| WBCnstr00029389 | |||||||||
| Construct_product | WBCnstr00014003 | ||||||||
| WBCnstr00029389 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (181) | |||||||||
| Interaction (173) | |||||||||
| Map_info | Map | IV | Position | 4.73348 | Error | 0.001045 | |||
| Positive | Positive_clone | ZK593 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00027145 | |||||||||
| WBPaper00028498 | |||||||||
| WBPaper00029292 | |||||||||
| WBPaper00031648 | |||||||||
| WBPaper00032322 | |||||||||
| WBPaper00034662 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060127 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
