WormBase Tree Display for Gene: WBGene00014001

WBGene00014001 SMap: S_parent: Sequence: ZK593
  Identity: Version: 2
    Name: CGC_name: pyk-2 Person_evidence: WBPerson360
      Sequence_name: ZK593.1
      Molecular_name: ZK593.1a
        ZK593.1a.1
        CE24731
        ZK593.1b
        CE06622
        ZK593.1c
        CE44718
        ZK593.1b.1
        ZK593.1c.1
      Other_name: CELE_ZK593.1 Accession_evidence: NDB BX284604
      Public_name: pyk-2
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 16 Jul 2009 12:31:02 WBPerson9133 Name_change: CGC_name: pyk-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pyk
    Allele (43)
    Strain: WBStrain00002117
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog: WBGene00062486 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028310 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00036739 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00144596 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00133973 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00118576 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00146307 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g10873 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7091 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16140 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12844 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6896 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15872 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16144 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6910 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g495 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1414 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00171.g6164 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g13892 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7987 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00007.g510 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12865 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014014 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06516 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06536 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40308100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11714 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00216464 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00075822 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00082157 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00295005 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000036 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000005874 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0031462 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0038258 Drosophila melanogaster From_analysis: OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0267385 Drosophila melanogaster From_analysis: OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      FB:FBgn0038952 Drosophila melanogaster From_analysis: OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-010907-1 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-031201-4 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-040801-230 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
      HGNC:9021 Homo sapiens From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:97591 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:97604 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:3336 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:3337 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Paralog: WBGene00009126 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: pyk-2 encodes one of two C. elegans pyruvate kinases; large-scale expression studies show that pyk-2 is expressed in the larval and adult intestine. Paper_evidence: WBPaper00031006
          Curator_confirmed: WBPerson1843
          Date_last_updated: 16 Jul 2009 00:00:00
      Automated_description: Predicted to enable pyruvate kinase activity. Predicted to be involved in glycolytic process. Located in endoplasmic reticulum; sarcomere; and striated muscle dense body. Expressed in intestine. Is an ortholog of human PKM (pyruvate kinase M1/2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK593.1a
      ZK593.1b
      ZK593.1c
    Corresponding_transcript: ZK593.1a.1
      ZK593.1b.1
      ZK593.1c.1
    Other_sequence (57)
    Associated_feature: WBsf646337
      WBsf997726
      WBsf229057
      WBsf229058
  Experimental_info: RNAi_result: WBRNAi00038344 Inferred_automatically: RNAi_primary
      WBRNAi00109708 Inferred_automatically: RNAi_primary
      WBRNAi00059522 Inferred_automatically: RNAi_primary
      WBRNAi00109755 Inferred_automatically: RNAi_primary
      WBRNAi00085270 Inferred_automatically: RNAi_primary
      WBRNAi00109802 Inferred_automatically: RNAi_primary
      WBRNAi00081180 Inferred_automatically: RNAi_primary
      WBRNAi00109661 Inferred_automatically: RNAi_primary
      WBRNAi00022067 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1225
      Expr7227
      Expr9438
      Expr1010495
      Expr1036258
      Expr1162940
      Expr2015204
      Expr2033438
    Drives_construct: WBCnstr00002883
      WBCnstr00029389
    Construct_product: WBCnstr00014003
      WBCnstr00029389
    Microarray_results (24)
    Expression_cluster (181)
    Interaction (173)
  Map_info: Map: IV Position: 4.73348 Error: 0.001045
    Positive: Positive_clone: ZK593 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene