WormBase Tree Display for Gene: WBGene00013712
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WBGene00013712 | SMap | S_parent | Sequence | Y106G6G | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dlc-6 | Person_evidence | WBPerson75 | |||||
WBPerson3088 | |||||||||
Sequence_name | Y106G6G.3 | ||||||||
Molecular_name | Y106G6G.3 | ||||||||
Y106G6G.3.1 | |||||||||
CE23213 | |||||||||
Other_name | CELE_Y106G6G.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | dlc-6 | ||||||||
DB_info | Database | AceView | gene | 1K897 | |||||
WormQTL | gene | WBGene00013712 | |||||||
WormFlux | gene | WBGene00013712 | |||||||
NDB | locus_tag | CELE_Y106G6G.3 | |||||||
NCBI | gene | 190923 | |||||||
RefSeq | protein | NM_060305.3 | |||||||
TREEFAM | TREEFAM_ID | TF354234 | |||||||
TrEMBL | UniProtAcc | Q9XWA8 | |||||||
UniProt_GCRP | UniProtAcc | Q9XWA8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 30 Oct 2007 11:44:39 | WBPerson2970 | Name_change | CGC_name | dlc-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dlc | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00103308 | ||||||||
00103309 | |||||||||
00120522 | |||||||||
00120523 | |||||||||
Ortholog (17) | |||||||||
Paralog | WBGene00010888 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00012424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00012425 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00043067 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Concise_description | dlc-6 encodes a putative dynein light chain 1; DLC-6 is orthologous to human DYNLL1 (OMIM:601562) and DYNLL2 (OMIM:608942), but much more divergent from them than its paralog DLC-1; DLC-6's other paralogs are DLC-2/-5; DLC-6 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00030897 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 29 Aug 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable dynein intermediate chain binding activity. Predicted to be involved in microtubule-based process. Predicted to be part of cytoplasmic dynein complex. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y106G6G.3 | |||||||
Corresponding_transcript | Y106G6G.3.1 | ||||||||
Associated_feature | WBsf218411 | ||||||||
Experimental_info | RNAi_result | WBRNAi00102936 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055268 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055266 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004503 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028157 | ||||||||
Expr1036134 | |||||||||
Expr1158802 | |||||||||
Drives_construct | WBCnstr00029548 | ||||||||
Construct_product | WBCnstr00029548 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (95) | |||||||||
Interaction | WBInteraction000354579 | ||||||||
WBInteraction000503319 | |||||||||
Map_info | Map | I | Position | 4.87627 | |||||
Positive | Positive_clone | Y106G6G | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |