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WormBase Tree Display for Gene: WBGene00013509

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Name Class

WBGene00013509SMapS_parentSequenceCHROMOSOME_I
IdentityVersion2
NameSequence_nameY71A12B.12
Molecular_nameY71A12B.12a
Y71A12B.12a.1
CE36899
Y71A12B.12b
CE35202
Y71A12B.12b.1
Other_nameY71A12B.tCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y71A12B.12Accession_evidenceNDBBX284601
Public_nameY71A12B.12
DB_infoDatabaseAceViewgene1O599
WormQTLgeneWBGene00013509
WormFluxgeneWBGene00013509
NDBlocus_tagCELE_Y71A12B.12
PanthergeneCAEEL|WormBase=WBGene00013509|UniProtKB=G5EC58
familyPTHR12904
NCBIgene173263
RefSeqproteinNM_001392970.1
NM_001047244.3
TREEFAMTREEFAM_IDTF322626
TrEMBLUniProtAccG5EC58
D0FY32
UniProt_GCRPUniProtAccG5EC58
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
215 Jun 2004 15:56:05WBPerson1847EventAcquires_mergeWBGene00013864
Acquires_mergeWBGene00013864
StatusLive
Gene_infoBiotypeSO:0001217
Allele (54)
RNASeq_FPKM (74)
GO_annotation00007101
Contained_in_operonCEOP1928
Ortholog (16)
Paralog (24)
Structured_descriptionAutomated_descriptionPredicted to be part of Cul2-RING ubiquitin ligase complex.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY71A12B.12a
Y71A12B.12b
Corresponding_CDS_historyY71A12B.12:wp126
Corresponding_transcriptY71A12B.12a.1
Y71A12B.12b.1
Associated_featureWBsf643827
WBsf985999
WBsf986000
WBsf986001
WBsf986002
WBsf1011152
WBsf1011153
WBsf1011154
WBsf218764
Experimental_infoRNAi_resultWBRNAi00058128Inferred_automaticallyRNAi_primary
WBRNAi00001834Inferred_automaticallyRNAi_primary
WBRNAi00004889Inferred_automaticallyRNAi_primary
WBRNAi00058844Inferred_automaticallyRNAi_primary
Expr_patternExpr1017055
Expr1036036
Expr1161549
Expr2008271
Expr2026511
Microarray_results (30)
Expression_clusterWBPaper00027339:daf-12(rh273)_upregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045618:puf-8_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045774:clk-1_upregulated_CoQ10_dependent
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_enriched
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F1_morc-1(tm6048)_downregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056167:Cry5B_upregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
WBPaper00057162:meg-3_meg-4_downregulated_sRNA
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060661:sensory-neuron_enriched
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:AMso_parent
WBPaper00061340:BWM_far_posterior
WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
WBPaper00061527:srj-42-srw-113
WBPaper00061527:tub-2_4713-daf-2_5288
WBPaper00061527:utx-1_2886-swan-1_2192
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_downregulated_Day11
WBPaper00065841:1_0
WBPaper00065841:1_2
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066093:E.coli-purE_downregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_5
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_downregulated
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00034739:N2lessDR1350
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036286:Pattern_B
WBPaper00036286:Pattern_H
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00037611:GLD-2-associated
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00039851:Live_C_albicans_vs_HK_C_albicans
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041174:environmental
WBPaper00041174:genotype_environment_interaction
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041267:SpaceFlight_Upregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
WBPaper00041939:control_vs_UVC-exposed_3h
WBPaper00041939:control_vs_UVC-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00042234:xpa-1_upregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048567:dnj-14_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
[cgc6390]:Cluster_E
[cgc6390]:mixed_oogenesis-somatic
Map_infoPositivePositive_cloneY71A12BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI22.4873
ReferenceWBPaper00064898
MethodGene