WormBase Tree Display for Gene: WBGene00013425
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| WBGene00013425 | SMap | S_parent | Sequence | Y66A7AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ceh-91 | Person_evidence | WBPerson260 | |||||
| WBPerson83 | |||||||||
| Sequence_name | Y66A7A.5 | ||||||||
| Molecular_name | Y66A7A.5 | ||||||||
| Y66A7A.5.1 | |||||||||
| CE34229 | |||||||||
| Other_name | CELE_Y66A7A.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ceh-91 | ||||||||
| DB_info | Database | AceView | gene | 3M713 | |||||
| WormQTL | gene | WBGene00013425 | |||||||
| WormFlux | gene | WBGene00013425 | |||||||
| NDB | locus_tag | CELE_Y66A7A.5 | |||||||
| NCBI | gene | 176594 | |||||||
| RefSeq | protein | NM_067102.5 | |||||||
| TrEMBL | UniProtAcc | Q7K6J1 | |||||||
| UniProt_GCRP | UniProtAcc | Q7K6J1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 May 2010 15:24:57 | WBPerson2970 | Name_change | CGC_name | ceh-91 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (215) | |||||||||
| Strain | WBStrain00003390 | ||||||||
| WBStrain00051942 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog | CSP32.g14692 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | |||||
| CSP32.g4877 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP39.g1072 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP39.g14250 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP39.g17787 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP39.g5574 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP39.g645 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g9062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | ceh-91 is a divergent homeobox gene; it encodes a highly divergent double homeobox domain (named Hochob), and two divergent homeodomains; most homeodomain proteins bind DNA and function as transcription factors; ceh-91 is expressed in intestine, renal gland cells, and head neurons; | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00005654 | |||||||||
| WBPaper00006525 | |||||||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00025108 | |||||||||
| WBPaper00046864 | |||||||||
| Person_evidence | WBPerson83 | ||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 20 Apr 2017 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and chromatin binding activity. Predicted to be involved in chromatin organization and regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in dorsal nerve cord; head muscle; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y66A7A.5 | |||||||
| Corresponding_CDS_history | Y66A7A.5:wp101 | ||||||||
| Corresponding_transcript | Y66A7A.5.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf978444 | ||||||||
| WBsf994442 | |||||||||
| WBsf994443 | |||||||||
| WBsf994444 | |||||||||
| WBsf1016043 | |||||||||
| WBsf225842 | |||||||||
| Transcription_factor | WBTranscriptionFactor001111 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00001859 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057926 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037714 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011726 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021251 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006345 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7092 | ||||||||
| Expr7736 | |||||||||
| Expr15655 | |||||||||
| Expr1017618 | |||||||||
| Expr1035996 | |||||||||
| Expr1161356 | |||||||||
| Expr2009916 | |||||||||
| Expr2028156 | |||||||||
| Drives_construct | WBCnstr00003859 | ||||||||
| WBCnstr00012881 | |||||||||
| WBCnstr00029642 | |||||||||
| WBCnstr00042423 | |||||||||
| Construct_product | WBCnstr00029642 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction | WBInteraction000528076 | ||||||||
| Map_info | Map | III | Position | 11.2571 | Error | 0.083073 | |||
| Positive | Positive_clone | Y66A7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00060123 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
