WormBase Tree Display for Gene: WBGene00013301
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WBGene00013301 | SMap | S_parent | Sequence | Y57G11C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y57G11C.3 | |||||||
Molecular_name | Y57G11C.3a | ||||||||
Y57G11C.3a.1 | |||||||||
CE24473 | |||||||||
Y57G11C.3b | |||||||||
CE14930 | |||||||||
Y57G11C.3b.1 | |||||||||
Other_name | CELE_Y57G11C.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y57G11C.3 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Contained_in_operon | CEOP4667 | ||||||||
Ortholog (37) | |||||||||
Structured_description | Concise_description | Y57G11C.3 encodes the C. elegans 6-phosphogluconolactonase (6PGL) ortholog; by homology, the product of Y57G11C.3 is predicted to catalyze the second reaction of the oxidative branch of the pentose-phosphate pathway in which 6-phosphogluconolactone is converted to 6-phosphogluconate. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 21 Jan 2009 00:00:00 | ||||||||
Automated_description | Predicted to enable 6-phosphogluconolactonase activity. Predicted to be involved in pentose-phosphate shunt, oxidative branch. Located in nucleus. Expressed in germ cell. Is an ortholog of human PGLS (6-phosphogluconolactonase). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y57G11C.3a | |||||||
Y57G11C.3b | |||||||||
Corresponding_transcript | Y57G11C.3a.1 | ||||||||
Y57G11C.3b.1 | |||||||||
Other_sequence (24) | |||||||||
Associated_feature | WBsf646565 | ||||||||
WBsf660937 | |||||||||
WBsf229526 | |||||||||
WBsf229527 | |||||||||
Experimental_info | RNAi_result (21) | ||||||||
Expr_pattern | Expr9437 | ||||||||
Expr15057 | |||||||||
Expr1014359 | |||||||||
Expr1035931 | |||||||||
Expr1161110 | |||||||||
Expr2008064 | |||||||||
Expr2026303 | |||||||||
Drives_construct | WBCnstr00029702 | ||||||||
Construct_product | WBCnstr00014002 | ||||||||
WBCnstr00029702 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (68) | |||||||||
Interaction (68) | |||||||||
Map_info | Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 12.4444 | |||||||
Reference (7) | |||||||||
Method | Gene |