WormBase Tree Display for Gene: WBGene00013215
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| WBGene00013215 | SMap | S_parent | Sequence | Y54G11A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54G11A.4 | |||||||
| Molecular_name | Y54G11A.4 | ||||||||
| Y54G11A.4.1 | |||||||||
| CE43439 | |||||||||
| Other_name | CELE_Y54G11A.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y54G11A.4 | ||||||||
| DB_info | Database | AceView | gene | 2O583 | |||||
| WormQTL | gene | WBGene00013215 | |||||||
| WormFlux | gene | WBGene00013215 | |||||||
| NDB | locus_tag | CELE_Y54G11A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013215|UniProtKB=Q9XW02 | |||||||
| family | PTHR16263 | ||||||||
| NCBI | gene | 190295 | |||||||
| RefSeq | protein | NM_064574.4 | |||||||
| TREEFAM | TREEFAM_ID | TF313343 | |||||||
| TrEMBL | UniProtAcc | Q9XW02 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XW02 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar01895915 | |||||||||
| WBVar01895916 | |||||||||
| WBVar01895917 | |||||||||
| WBVar01895918 | |||||||||
| WBVar02018475 | |||||||||
| WBVar00556703 | |||||||||
| WBVar01498702 | |||||||||
| WBVar01696400 | |||||||||
| WBVar01547891 | |||||||||
| WBVar01547892 | |||||||||
| WBVar00297154 | |||||||||
| WBVar01547893 | |||||||||
| WBVar02124400 | |||||||||
| WBVar00788019 | |||||||||
| WBVar00788020 | |||||||||
| WBVar00014333 | |||||||||
| WBVar00788021 | |||||||||
| WBVar00788022 | |||||||||
| WBVar01721541 | |||||||||
| WBVar00014338 | |||||||||
| WBVar00788023 | |||||||||
| WBVar00788024 | |||||||||
| WBVar00788025 | |||||||||
| WBVar00014343 | |||||||||
| WBVar00788026 | |||||||||
| WBVar01496893 | |||||||||
| WBVar00788027 | |||||||||
| WBVar00788028 | |||||||||
| WBVar00788029 | |||||||||
| WBVar00788030 | |||||||||
| WBVar00788031 | |||||||||
| WBVar00788032 | |||||||||
| WBVar00788033 | |||||||||
| WBVar00788034 | |||||||||
| WBVar00788035 | |||||||||
| WBVar00788036 | |||||||||
| WBVar00788037 | |||||||||
| WBVar00788038 | |||||||||
| WBVar00788039 | |||||||||
| WBVar01319855 | |||||||||
| WBVar00788040 | |||||||||
| WBVar00788041 | |||||||||
| WBVar01319857 | |||||||||
| WBVar00788042 | |||||||||
| WBVar00788043 | |||||||||
| WBVar01499490 | |||||||||
| WBVar01498941 | |||||||||
| WBVar01498758 | |||||||||
| WBVar00384848 | |||||||||
| WBVar00384849 | |||||||||
| WBVar00384850 | |||||||||
| WBVar00384851 | |||||||||
| WBVar00384852 | |||||||||
| WBVar00384853 | |||||||||
| WBVar00384854 | |||||||||
| WBVar00384855 | |||||||||
| WBVar00384856 | |||||||||
| WBVar00384857 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00013216 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in intestine; neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Tetratricopeptide repeat protein 38 and Tetratricopeptide-like helical domain superfamily. Is an ortholog of human TTC38 (tetratricopeptide repeat domain 38). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G11A.4 | |||||||
| Corresponding_CDS_history | Y54G11A.4:wp198 | ||||||||
| Corresponding_transcript | Y54G11A.4.1 | ||||||||
| Other_sequence | BMC04875_1 | ||||||||
| Associated_feature | WBsf658399 | ||||||||
| WBsf717045 | |||||||||
| WBsf990678 | |||||||||
| WBsf990679 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020986 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057429 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014687 | ||||||||
| Expr1160865 | |||||||||
| Expr2007928 | |||||||||
| Expr2026170 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction | WBInteraction000177174 | ||||||||
| WBInteraction000413720 | |||||||||
| WBInteraction000578357 | |||||||||
| Map_info | Positive | Positive_clone | Y54G11A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 22.9011 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
