WormBase Tree Display for Gene: WBGene00013081

WBGene00013081 SMap: S_parent: Sequence: Y51A2D
  Identity: Version: 2
    Name: CGC_name: txt-14 Person_evidence: WBPerson19237
      Sequence_name: Y51A2D.14
      Molecular_name: Y51A2D.14
        Y51A2D.14.1
        CE19210
        Y51A2D.14.2
      Other_name: CELE_Y51A2D.14 Accession_evidence: NDB BX284605
      Public_name: txt-14
    DB_info: Database: AceView gene 5T63
        WormQTL gene WBGene00013081
        WormFlux gene WBGene00013081
        NDB locus_tag CELE_Y51A2D.14
        NCBI gene 180214
        RefSeq protein NM_075232.9
        TrEMBL UniProtAcc Q9XXR2
        UniProt_GCRP UniProtAcc Q9XXR2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 28 Jan 2020 11:43:42 WBPerson1983 Name_change: CGC_name: txt-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: txt
    Allele (14)
    RNASeq_FPKM (74)
    Ortholog: WBGene00107817 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00107818 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00156846 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00027966 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069817 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00027965 Caenorhabditis briggsae From_analysis: WormBase-Compara
      Csp5_scaffold_02160.g25171 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19573 Caenorhabditis latens From_analysis: WormBase-Compara
      Sp34_50385720 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Paralog: WBGene00016923 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00271796 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in head mesodermal cell; intestine; mechanosensory neurons; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on RNA-seq and microarray studies. Is affected by seventeen chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y51A2D.14
    Corresponding_transcript: Y51A2D.14.1
      Y51A2D.14.2
    Other_sequence (17)
    Associated_feature: WBsf655140
      WBsf1002944
      WBsf1002945
      WBsf1002946
      WBsf1002947
      WBsf1002948
      WBsf1021502
      WBsf1021503
      WBsf1021504
      WBsf1021505
  Experimental_info: RNAi_result: WBRNAi00020870 Inferred_automatically: RNAi_primary
      WBRNAi00057130 Inferred_automatically: RNAi_primary
      WBRNAi00037345 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019305
      Expr1160578
      Expr2007771
      Expr2026011
    Microarray_results (21)
    Expression_cluster (136)
    Interaction (16)
  Map_info: Map: V Position: 16.9455
    Positive: Positive_clone: Y51A2D Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00060839
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene