WormBase Tree Display for Gene: WBGene00013081
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| WBGene00013081 | SMap | S_parent | Sequence | Y51A2D | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | txt | |||||
| Allele (14) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog | WBGene00107817 | Pristionchus pacificus | From_analysis | OMA | ||
| Inparanoid_8 | ||||||
| WormBase-Compara | ||||||
| WBGene00107818 | Pristionchus pacificus | From_analysis | OMA | |||
| Inparanoid_8 | ||||||
| WBGene00156846 | Caenorhabditis brenneri | From_analysis | OMA | |||
| Inparanoid_8 | ||||||
| WormBase-Compara | ||||||
| WBGene00027966 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
| OMA | ||||||
| Inparanoid_8 | ||||||
| WormBase-Compara | ||||||
| WBGene00069817 | Caenorhabditis remanei | From_analysis | OMA | |||
| Inparanoid_8 | ||||||
| WormBase-Compara | ||||||
| WBGene00027965 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||
| Csp5_scaffold_02160.g25171 | Caenorhabditis sinica | From_analysis | WormBase-Compara | |||
| FL83_19573 | Caenorhabditis latens | From_analysis | WormBase-Compara | |||
| Sp34_50385720 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||
| Paralog | WBGene00016923 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||
| WormBase-Compara | ||||||
| WBGene00271796 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; mechanosensory neurons; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on RNA-seq and microarray studies. Is affected by seventeen chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y51A2D.14 | ||||
| Corresponding_transcript | Y51A2D.14.1 | |||||
| Y51A2D.14.2 | ||||||
| Other_sequence (17) | ||||||
| Associated_feature | WBsf655140 | |||||
| WBsf1002944 | ||||||
| WBsf1002945 | ||||||
| WBsf1002946 | ||||||
| WBsf1002947 | ||||||
| WBsf1002948 | ||||||
| WBsf1021502 | ||||||
| WBsf1021503 | ||||||
| WBsf1021504 | ||||||
| WBsf1021505 | ||||||
| Experimental_info | RNAi_result | WBRNAi00020870 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00057130 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00037345 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1019305 | |||||
| Expr1160578 | ||||||
| Expr2007771 | ||||||
| Expr2026011 | ||||||
| Microarray_results (21) | ||||||
| Expression_cluster (136) | ||||||
| Interaction (16) | ||||||
| Map_info | Map | V | Position | 16.9455 | ||
| Positive | Positive_clone | Y51A2D | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00060839 | |||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
